HHsearch alignment for GI: 254780434 and conserved domain: TIGR03572
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=98.16 E-value=5.5e-05 Score=53.40 Aligned_cols=208 Identities=16% Similarity=0.176 Sum_probs=113.0
Q ss_pred CCEECCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHH
Q ss_conf 87335997485346888677988874036752410200136878998862688425554100002477777889998764
Q gi|254780434|r 50 AGISLSNPLGMAAGYDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSK 129 (362)
Q Consensus 50 ~Gl~~~nPiglAaG~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~ 129 (362)
T Consensus 19 k~~~~~~~~~~--g-d-P~~~ak~~~~~g~d~lhivDl--d----------------~a~~---~~~--~n~~~I~~i~~ 71 (232)
T TIGR03572 19 KTVQFKDPRYI--G-D-PVNAARIYNAKGADELIVLDI--D----------------ASKR---GRE--PLFELISNLAE 71 (232)
T ss_pred ECCCCCCCEEC--C-C-HHHHHHHHHHCCCCEEEEEEC--C----------------CCCC---CCC--CHHHHHHHHHH
T ss_conf 78478776578--8-9-999999999869999999968--7----------------6434---882--17999999999
Q ss_pred HHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 1000121000110454246788776555420675526983033365322110000234321111224445565531268-
Q gi|254780434|r 130 IQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGK- 208 (362)
Q Consensus 130 ~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~- 208 (362)
T Consensus 72 ---~~~ipi~vGGGIrs~e~~~~------ll~~GadkViigs~--------a~~~p~~~~~~~~~~G~q~ivvsiD~k~~ 134 (232)
T TIGR03572 72 ---ECFMPLTVGGGIRSLEDAKK------LLSLGADKVSINTA--------ALENPDLIEEAARRFGSQCVVVSIDVKKE 134 (232)
T ss_pred ---HCCCCEEEEECEEEHHHHHH------HHHCCCCEEEECHH--------HHHCCHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf ---72985899713303899999------99769968993454--------52193577899998699458999998416
Q ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf ----8517865057777488899999876449829998066555323457754463221135645424689999999740
Q gi|254780434|r 209 ----FVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRV 284 (362)
Q Consensus 209 ----~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~ 284 (362)
T Consensus 135 ~~~~~~~v~~~g~~~~~~~~~~~~i~~~~~~g~geii~td--I~~DG-----------~~~G~d-----~~l~~~i~~~~ 196 (232)
T TIGR03572 135 LDGSDYKVYSDNGRRATGRDPVEWAREAEQLGAGEILLNS--IDRDG-----------TMKGYD-----LELIKTVSDAV 196 (232)
T ss_pred CCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEE--ECCCC-----------CCCCCC-----HHHHHHHHHHC
T ss_conf 7787279996677635798799999998735998999988--85768-----------567689-----99999999868
Q ss_pred CCCEEEEEECCCCCHHHHHHHH-HCCCCEEEECHHHHC
Q ss_conf 8974899967889999999999-839997545278770
Q gi|254780434|r 285 GPKIAIIGTGGISSTKDALDKI-MAGANLIQLYSAMIY 321 (362)
Q Consensus 285 ~~~i~IIg~GGI~s~~Da~e~l-~aGAs~VQi~Tali~ 321 (362)
T Consensus 197 --~~piiasGGi~~~~di~~l~~~~~~~gv~~gs~f~~ 232 (232)
T TIGR03572 197 --SIPVIALGGAGSLDDLVEVALEAGASAVAAASLFHF 232 (232)
T ss_pred --CCCEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf --999999889899999999998589819997211449