HHsearch alignment for GI: 254780434 and conserved domain: cd00452

>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=96.55  E-value=0.052  Score=33.32  Aligned_cols=133  Identities=11%  Similarity=0.146  Sum_probs=81.7

Q ss_pred             HHHHHHHHHH-CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf             8776555420-675526983033365322110000234321111224445565531268851786505777748889999
Q gi|254780434|r  151 LDYVSGIRLF-FTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIA  229 (362)
Q Consensus       151 ~dy~~~~~~~-~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia  229 (362)
T Consensus        16 ~~a~~~~~al~~~Gi~~iEitl~t~~a~--------~~----i~~l~~~--------~~~--~~iGaGTV~~----~~~~   69 (190)
T cd00452          16 EDALALAEALIEGGIRAIEITLRTPGAL--------EA----IRALRKE--------FPE--ALIGAGTVLT----PEQA   69 (190)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCHHH--------HH----HHHHHHH--------CCC--CEEEECCCCC----HHHH
T ss_conf             9999999999986998899967880299--------99----9999986--------898--0896523477----9999


Q ss_pred             HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCC
Q ss_conf             98764498299980665553234577544632211356454246899999997408974899967889999999999839
Q gi|254780434|r  230 VEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAG  309 (362)
Q Consensus       230 ~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aG  309 (362)
T Consensus        70 ~~a~~aGa~FivsP~~---------------------------~~~v~~~a~~~---~~~--~iPGv~TpsEi~~A~~~G  117 (190)
T cd00452          70 DAAIAAGAQFIVSPGL---------------------------DPEVVKAANRA---GIP--LLPGVATPTEIMQALELG  117 (190)
T ss_pred             HHHHHCCCCEEECCCC---------------------------CHHHHHHHHHC---CCC--EECCCCCHHHHHHHHHCC
T ss_conf             9999859989973779---------------------------99999999982---996--657879999999999879


Q ss_pred             CCEEEECHHHHCCCHHHHHHHH----------------HHHHHHHHHCCC
Q ss_conf             9975452787706978999999----------------999999998389
Q gi|254780434|r  310 ANLIQLYSAMIYEGISLPKRII----------------QGLSDFLNKENE  343 (362)
Q Consensus       310 As~VQi~Tali~~Gp~~~~~I~----------------~~L~~~l~~~G~  343 (362)
T Consensus       118 ~~~vK~FPa~~~-G~~~lkal~~pfp~~~~~ptGGI~~~N~~~yl~~-gv  165 (190)
T cd00452         118 ADIVKLFPAEAV-GPAYIKALKGPFPQVRFMPTGGVSLDNAAEWLAA-GV  165 (190)
T ss_pred             CCEEEECCCCCC-CHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHC-CC
T ss_conf             998998955114-9999999855489993899679998889999968-99