HHsearch alignment for GI: 254780434 and conserved domain: cd00452
>cd00452 KDPG_aldolase KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.
Probab=96.55 E-value=0.052 Score=33.32 Aligned_cols=133 Identities=11% Similarity=0.146 Sum_probs=81.7
Q ss_pred HHHHHHHHHH-CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 8776555420-675526983033365322110000234321111224445565531268851786505777748889999
Q gi|254780434|r 151 LDYVSGIRLF-FTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIA 229 (362)
Q Consensus 151 ~dy~~~~~~~-~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia 229 (362)
T Consensus 16 ~~a~~~~~al~~~Gi~~iEitl~t~~a~--------~~----i~~l~~~--------~~~--~~iGaGTV~~----~~~~ 69 (190)
T cd00452 16 EDALALAEALIEGGIRAIEITLRTPGAL--------EA----IRALRKE--------FPE--ALIGAGTVLT----PEQA 69 (190)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHH--------HH----HHHHHHH--------CCC--CEEEECCCCC----HHHH
T ss_conf 9999999999986998899967880299--------99----9999986--------898--0896523477----9999
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCC
Q ss_conf 98764498299980665553234577544632211356454246899999997408974899967889999999999839
Q gi|254780434|r 230 VEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAG 309 (362)
Q Consensus 230 ~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aG 309 (362)
T Consensus 70 ~~a~~aGa~FivsP~~---------------------------~~~v~~~a~~~---~~~--~iPGv~TpsEi~~A~~~G 117 (190)
T cd00452 70 DAAIAAGAQFIVSPGL---------------------------DPEVVKAANRA---GIP--LLPGVATPTEIMQALELG 117 (190)
T ss_pred HHHHHCCCCEEECCCC---------------------------CHHHHHHHHHC---CCC--EECCCCCHHHHHHHHHCC
T ss_conf 9999859989973779---------------------------99999999982---996--657879999999999879
Q ss_pred CCEEEECHHHHCCCHHHHHHHH----------------HHHHHHHHHCCC
Q ss_conf 9975452787706978999999----------------999999998389
Q gi|254780434|r 310 ANLIQLYSAMIYEGISLPKRII----------------QGLSDFLNKENE 343 (362)
Q Consensus 310 As~VQi~Tali~~Gp~~~~~I~----------------~~L~~~l~~~G~ 343 (362)
T Consensus 118 ~~~vK~FPa~~~-G~~~lkal~~pfp~~~~~ptGGI~~~N~~~yl~~-gv 165 (190)
T cd00452 118 ADIVKLFPAEAV-GPAYIKALKGPFPQVRFMPTGGVSLDNAAEWLAA-GV 165 (190)
T ss_pred CCEEEECCCCCC-CHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHC-CC
T ss_conf 998998955114-9999999855489993899679998889999968-99