HHsearch alignment for GI: 254780434 and conserved domain: cd00953
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=95.29 E-value=0.25 Score=28.72 Aligned_cols=197 Identities=14% Similarity=0.174 Sum_probs=88.5
Q ss_pred CCEEECCC-CCC--CHHHHHHHHHCCCCEEEC-CCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 97485346-888--677988874036752410-20013687899886268842555410000247777788999876410
Q gi|254780434|r 56 NPLGMAAG-YDK--NAEVPIELLKLGFGFVEI-GTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQ 131 (362)
Q Consensus 56 nPiglAaG-~dk--~~~~~~~l~~~G~G~v~~-ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~ 131 (362)
T Consensus 10 TPF--~~g~iD~~~l~~~i~~l~~~Gv~gi~v~Gs-tGE~~---------~L------------s~eEr~~vi~~~~~~~ 65 (279)
T cd00953 10 TPF--TGNKIDKEKFKKHCENLISKGIDYVFVAGT-TGLGP---------SL------------SFQEKLELLKAYSDIT 65 (279)
T ss_pred CCC--CCCCCCHHHHHHHHHHHHHCCCCEEEECCH-HHHHH---------HC------------CHHHHHHHHHHHHHHC
T ss_conf 784--959679999999999999779999997813-12165---------58------------9999999999999967
Q ss_pred HCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 00121000110454246788776555420675526983033365322110000234321111224445565531268851
Q gi|254780434|r 132 PTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVP 211 (362)
Q Consensus 132 ~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~P 211 (362)
T Consensus 66 --~~vi~~vg~~-~~~~ai-~la~~A~~~--Gad~i~--~~pP~y~~---~~~~~~l~~yf~~va~-----------~lP 123 (279)
T cd00953 66 --DKVIFQVGSL-NLEESI-ELARAAKSF--GIYAIA--SLPPYYFP---GIPEEWLIKYFTDISS-----------PYP 123 (279)
T ss_pred --CCEEEEECCC-CHHHHH-HHHHHHHHC--CCCEEE--EECCCCCC---CCCHHHHHHHHHHHHH-----------HCC
T ss_conf --9818997778-799999-999999977--999899--76886789---9999999999999985-----------098
Q ss_pred EEEECCCCCCHHHH-HHHHHHHHHC-C-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 78650577774888-9999987644-9-8299980665553234577544632211356454246899999997408974
Q gi|254780434|r 212 IFLKISPDLSEEEL-DDIAVEVLSH-K-VEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKI 288 (362)
Q Consensus 212 i~vKLsPd~~~~~i-~~ia~~a~~~-g-~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i 288 (362)
T Consensus 124 i~lYn~P~~tg~~l~~~~~~~L~~~~~~v~giK--ds~-------------------~d------~~~~~~~~~-~~~~~ 175 (279)
T cd00953 124 TFIYNYPKATGYDINARMAKEIKKAGGDIIGVK--DTN-------------------ED------ISHMLEYKR-LVPDF 175 (279)
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEE--CCC-------------------CC------HHHHHHHHH-HCCCC
T ss_conf 769967753588889999999981799889997--387-------------------69------999999998-48994
Q ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHH
Q ss_conf 89996788999999999983999754527877069789999999
Q gi|254780434|r 289 AIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKRIIQ 332 (362)
Q Consensus 289 ~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~ 332 (362)
T Consensus 176 ~v~-~G---~d~~~~~~l~~Ga~G~i~~~~n~~--P~~~~~l~~ 213 (279)
T cd00953 176 KVY-SG---PDSLIFSALRSGLDGSVAAASNYL--PEVFVKIKD 213 (279)
T ss_pred EEE-CC---CHHHHHHHHHCCCEEEEEHHHHHH--HHHHHHHHH
T ss_conf 785-69---579999999809979997089885--999999999