HHsearch alignment for GI: 254780434 and conserved domain: cd02922

>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain. FCB2 (AKA L-lactate:cytochrome c oxidoreductase) is a respiratory enzyme located in the intermembrane space of fungal mitochondria which catalyzes the oxidation of L-lactate to pyruvate. FCB2 also participates in a short electron-transport chain involving cytochrome c and cytochrome oxidase which ultimately directs the reducing equivalents gained from L-lactate oxidation to oxygen, yielding one molecule of ATP for every L-lactate molecule consumed. FCB2 is composed of 2 domains: a C-terminal flavin-binding domain, which includes the active site for lacate oxidation, and an N-terminal b2-cytochrome domain, required for efficient cytochrome c reduction. FCB2 is a homotetramer and contains two noncovalently bound cofactors, FMN and heme per subunit.
Probab=99.73  E-value=4.5e-14  Score=114.63  Aligned_cols=289  Identities=17%  Similarity=0.158  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHH-HHHHHHCC-CCCCCCCCEEEECCEECCCCEEEC----CC-CCCCHHH--HHHHHHCCCCEEEC--CCC
Q ss_conf             78899999999-62011104-678896311688873359974853----46-8886779--88874036752410--200
Q gi|254780434|r   19 EIAHHLSIVAL-KSGLLSFF-PVHSDPRLNTKVAGISLSNPLGMA----AG-YDKNAEV--PIELLKLGFGFVEI--GTV   87 (362)
Q Consensus        19 e~ah~~~~~~~-~~~~~~~~-~~~~~~~L~~~~~Gl~~~nPiglA----aG-~dk~~~~--~~~l~~~G~G~v~~--kti   87 (362)
T Consensus        26 e~Tl~~N~~Af~~~~l~Pr~L~dvs~~dtst~l~G~~~~~P~~iAP~g~~~l~hp~gE~a~AraA~~~gi~~~lSt~ss~  105 (344)
T cd02922          26 EITLRENLEAFQRIRFRPRVLRDVEKVDTSTTILGHKVSLPFFISPAALAKLAHPDGELNLARAAGKHGILQMISTNASC  105 (344)
T ss_pred             HHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCEECCCCEEECHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             49999999999847676533248888988556898336775156647776432884569999999974886574057778


Q ss_pred             CCCCC-CCCC--CCCEEEEECCCCCEEECCCCCCC-HHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             13687-8998--86268842555410000247777-78899987641000121000110454246788776555420675
Q gi|254780434|r   88 TPHPQ-AGNP--RPRVFRLTKDRAIINKLGFNNAG-YHTVFSRLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTI  163 (362)
Q Consensus        88 t~~p~-~GNp--~PR~~r~~~~~~iiN~~Gl~N~G-~~~~~~~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~  163 (362)
T Consensus       106 slEdVa~a~~~~~~~wfQLY~---------~~dr~~~~~li~RA~~aG~~-alvlTvD~p~~G~-R~rd~r~~~~~~~~~  174 (344)
T cd02922         106 SLEEIVDARPPDQPLFFQLYV---------NKDRTKTEELLKRAEKLGAK-AIFLTVDAPVLGK-RERDERLKAEEAVSD  174 (344)
T ss_pred             CHHHHHHHCCCCCCEEEEEEC---------CCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCC-CHHHHHCCCCCCCCC
T ss_conf             889999865689866999824---------77679999999999986998-8999567888775-226665077778876


Q ss_pred             CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE--CCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             5269830333653221100002343211112244455655312688517865--05777748889999987644982999
Q gi|254780434|r  164 ASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLK--ISPDLSEEELDDIAVEVLSHKVEGII  241 (362)
Q Consensus       164 aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vK--LsPd~~~~~i~~ia~~a~~~g~dGiv  241 (362)
T Consensus       175 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~tw~di~~lr~~~~~plivKGIl~~--------~DA~~A~~~G~dgIi  239 (344)
T cd02922         175 GPAGKKTKAKGG-------GAGRAMSGFIDPTLTWDDIKWLRKHTKLPIVLKGVQTV--------EDAVLAAEYGVDGIV  239 (344)
T ss_pred             CCCCCCCCCCCC-------HHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCH--------HHHHHHHHCCCCEEE
T ss_conf             654333344663-------16677775048889999999999866997010025779--------999999965998899


Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf             80665553234577544632211356454246899999997---408974899967889999999999839997545278
Q gi|254780434|r  242 VSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQ---RVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSA  318 (362)
Q Consensus       242 ~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~---~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Ta  318 (362)
T Consensus       240 VSNH----------GGRqLD~-------~~~~i~~Lp~I~~~~~av~~~~~v~~DgGiR~G~DV~KAlALGA~aV~iGRp  302 (344)
T cd02922         240 LSNH----------GGRQLDT-------APAPIEVLLEIRKHCPEVFDKIEVYVDGGVRRGTDVLKALCLGAKAVGLGRP  302 (344)
T ss_pred             EECC----------CCCCCCC-------CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECHH
T ss_conf             7188----------6212578-------8318999899999889858870899718857578999999769998976789


Q ss_pred             HHCC----CH----HHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf             7706----97----89999999999999983899778961
Q gi|254780434|r  319 MIYE----GI----SLPKRIIQGLSDFLNKENEVNFENIR  350 (362)
Q Consensus       319 li~~----Gp----~~~~~I~~~L~~~l~~~G~~si~e~i  350 (362)
T Consensus       303 ~l~gla~~G~~Gv~~~l~il~~El~~~M~l~G~~si~~l~  342 (344)
T cd02922         303 FLYALSAYGEEGVEKAIQILKDEIETTMRLLGVTSLDQLG  342 (344)
T ss_pred             HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf             9999884439999999999999999999985899888749