HHsearch alignment for GI: 254780434 and conserved domain: cd02922
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain. FCB2 (AKA L-lactate:cytochrome c oxidoreductase) is a respiratory enzyme located in the intermembrane space of fungal mitochondria which catalyzes the oxidation of L-lactate to pyruvate. FCB2 also participates in a short electron-transport chain involving cytochrome c and cytochrome oxidase which ultimately directs the reducing equivalents gained from L-lactate oxidation to oxygen, yielding one molecule of ATP for every L-lactate molecule consumed. FCB2 is composed of 2 domains: a C-terminal flavin-binding domain, which includes the active site for lacate oxidation, and an N-terminal b2-cytochrome domain, required for efficient cytochrome c reduction. FCB2 is a homotetramer and contains two noncovalently bound cofactors, FMN and heme per subunit.
Probab=99.73 E-value=4.5e-14 Score=114.63 Aligned_cols=289 Identities=17% Similarity=0.158 Sum_probs=164.4
Q ss_pred HHHHHHHHHHH-HHHHHHCC-CCCCCCCCEEEECCEECCCCEEEC----CC-CCCCHHH--HHHHHHCCCCEEEC--CCC
Q ss_conf 78899999999-62011104-678896311688873359974853----46-8886779--88874036752410--200
Q gi|254780434|r 19 EIAHHLSIVAL-KSGLLSFF-PVHSDPRLNTKVAGISLSNPLGMA----AG-YDKNAEV--PIELLKLGFGFVEI--GTV 87 (362)
Q Consensus 19 e~ah~~~~~~~-~~~~~~~~-~~~~~~~L~~~~~Gl~~~nPiglA----aG-~dk~~~~--~~~l~~~G~G~v~~--kti 87 (362)
T Consensus 26 e~Tl~~N~~Af~~~~l~Pr~L~dvs~~dtst~l~G~~~~~P~~iAP~g~~~l~hp~gE~a~AraA~~~gi~~~lSt~ss~ 105 (344)
T cd02922 26 EITLRENLEAFQRIRFRPRVLRDVEKVDTSTTILGHKVSLPFFISPAALAKLAHPDGELNLARAAGKHGILQMISTNASC 105 (344)
T ss_pred HHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCEECCCCEEECHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 49999999999847676533248888988556898336775156647776432884569999999974886574057778
Q ss_pred CCCCC-CCCC--CCCEEEEECCCCCEEECCCCCCC-HHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 13687-8998--86268842555410000247777-78899987641000121000110454246788776555420675
Q gi|254780434|r 88 TPHPQ-AGNP--RPRVFRLTKDRAIINKLGFNNAG-YHTVFSRLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTI 163 (362)
Q Consensus 88 t~~p~-~GNp--~PR~~r~~~~~~iiN~~Gl~N~G-~~~~~~~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~ 163 (362)
T Consensus 106 slEdVa~a~~~~~~~wfQLY~---------~~dr~~~~~li~RA~~aG~~-alvlTvD~p~~G~-R~rd~r~~~~~~~~~ 174 (344)
T cd02922 106 SLEEIVDARPPDQPLFFQLYV---------NKDRTKTEELLKRAEKLGAK-AIFLTVDAPVLGK-RERDERLKAEEAVSD 174 (344)
T ss_pred CHHHHHHHCCCCCCEEEEEEC---------CCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCC-CHHHHHCCCCCCCCC
T ss_conf 889999865689866999824---------77679999999999986998-8999567888775-226665077778876
Q ss_pred CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE--CCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 5269830333653221100002343211112244455655312688517865--05777748889999987644982999
Q gi|254780434|r 164 ASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLK--ISPDLSEEELDDIAVEVLSHKVEGII 241 (362)
Q Consensus 164 aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vK--LsPd~~~~~i~~ia~~a~~~g~dGiv 241 (362)
T Consensus 175 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~tw~di~~lr~~~~~plivKGIl~~--------~DA~~A~~~G~dgIi 239 (344)
T cd02922 175 GPAGKKTKAKGG-------GAGRAMSGFIDPTLTWDDIKWLRKHTKLPIVLKGVQTV--------EDAVLAAEYGVDGIV 239 (344)
T ss_pred CCCCCCCCCCCC-------HHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCH--------HHHHHHHHCCCCEEE
T ss_conf 654333344663-------16677775048889999999999866997010025779--------999999965998899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHH
Q ss_conf 80665553234577544632211356454246899999997---408974899967889999999999839997545278
Q gi|254780434|r 242 VSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQ---RVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSA 318 (362)
Q Consensus 242 ~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~---~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Ta 318 (362)
T Consensus 240 VSNH----------GGRqLD~-------~~~~i~~Lp~I~~~~~av~~~~~v~~DgGiR~G~DV~KAlALGA~aV~iGRp 302 (344)
T cd02922 240 LSNH----------GGRQLDT-------APAPIEVLLEIRKHCPEVFDKIEVYVDGGVRRGTDVLKALCLGAKAVGLGRP 302 (344)
T ss_pred EECC----------CCCCCCC-------CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECHH
T ss_conf 7188----------6212578-------8318999899999889858870899718857578999999769998976789
Q ss_pred HHCC----CH----HHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 7706----97----89999999999999983899778961
Q gi|254780434|r 319 MIYE----GI----SLPKRIIQGLSDFLNKENEVNFENIR 350 (362)
Q Consensus 319 li~~----Gp----~~~~~I~~~L~~~l~~~G~~si~e~i 350 (362)
T Consensus 303 ~l~gla~~G~~Gv~~~l~il~~El~~~M~l~G~~si~~l~ 342 (344)
T cd02922 303 FLYALSAYGEEGVEKAIQILKDEIETTMRLLGVTSLDQLG 342 (344)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 9999884439999999999999999999985899888749