HHsearch alignment for GI: 254780434 and conserved domain: cd03332
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=99.67 E-value=5.9e-13 Score=107.10 Aligned_cols=290 Identities=18% Similarity=0.239 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHH-HHHHHCC-CCCCCCCCEEEECCEECCCCEEEC----CC-CCCCHHH--HHHHHHCCCCEEECC--CC
Q ss_conf 788999999996-2011104-678896311688873359974853----46-8886779--888740367524102--00
Q gi|254780434|r 19 EIAHHLSIVALK-SGLLSFF-PVHSDPRLNTKVAGISLSNPLGMA----AG-YDKNAEV--PIELLKLGFGFVEIG--TV 87 (362)
Q Consensus 19 e~ah~~~~~~~~-~~~~~~~-~~~~~~~L~~~~~Gl~~~nPiglA----aG-~dk~~~~--~~~l~~~G~G~v~~k--ti 87 (362)
T Consensus 47 e~tl~~N~~af~~~~l~PRvL~dv~~~d~~t~llG~~~~~P~~iaP~g~~~l~hp~gE~~~AraA~~~g~~~~lSt~ss~ 126 (383)
T cd03332 47 ESTARANRDAFSRWRIVPRMLRGVTERDLSVELFGRTLAAPLLLAPIGVQELFHPDAELATARAAAELGVPYILSTASSS 126 (383)
T ss_pred HHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCEECCCCEEECHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCC
T ss_conf 69999999999855776711358888888645798156777388778774414897789999999983586220577678
Q ss_pred CCCCC-CCC-CCCCEEEEE--CCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEE----CCCCCH-----------H
Q ss_conf 13687-899-886268842--5554100002477777889998764100012100011----045424-----------6
Q gi|254780434|r 88 TPHPQ-AGN-PRPRVFRLT--KDRAIINKLGFNNAGYHTVFSRLSKIQPTSPIGINLG----ANKDSK-----------D 148 (362)
Q Consensus 88 t~~p~-~GN-p~PR~~r~~--~~~~iiN~~Gl~N~G~~~~~~~l~~~~~~~pi~vsI~----~~~~s~-----------~ 148 (362)
T Consensus 127 slEeva~~~~~~~~wfQLY~~~Dr~~----------~~~ll~RA~~aG~~-aLvlTVD~Pv~G~Rerd~r~g~~P~~~~~ 195 (383)
T cd03332 127 SIEDVAAAAGDAPRWFQLYWPKDDDL----------TESLLRRAEKAGYR-VLVVTLDTWSLGWRPRDLDLGYLPFLRGI 195 (383)
T ss_pred CHHHHHHHCCCCCEEEEEECCCCHHH----------HHHHHHHHHHCCCC-EEEEECCCCCCCCCHHHHHCCCCCCCCCH
T ss_conf 89999986689963999951588899----------99999999973897-79992268666876545532688643303
Q ss_pred HHHHHHH---HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE--CCCCCCHH
Q ss_conf 7887765---554206755269830333653221100002343211112244455655312688517865--05777748
Q gi|254780434|r 149 FILDYVS---GIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLK--ISPDLSEE 223 (362)
Q Consensus 149 ~~~dy~~---~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vK--LsPd~~~~ 223 (362)
T Consensus 196 ~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~d~~ltW~di~wlr~~w~~plilKGI~~~----- 264 (383)
T cd03332 196 GIANYFSDPVFRKKLA---EPVGEDPEAPPPMEA---AVARFVSVFSGPSLTWEDLAFLREWTDLPIVLKGILHP----- 264 (383)
T ss_pred HHHHHCCCHHHHHHHC---CCCCCCCCCCCCCHH---HHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCH-----
T ss_conf 6777547889999732---567765456775014---59999985378889989999999876998532356899-----
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
Q ss_conf 88999998764498299980665553234577544632211356454246899999997408974899967889999999
Q gi|254780434|r 224 ELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDAL 303 (362)
Q Consensus 224 ~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~ 303 (362)
T Consensus 265 ---eDA~~A~~~G~dgIiVSNH----------GGRQLD~-------apa~i~~LpeI~~aV~~~~~V~~DgGIRrG~DV~ 324 (383)
T cd03332 265 ---DDARRAVEAGVDGVVVSNH----------GGRQVDG-------SIAALDALPEIVEAVGDRLTVLFDSGVRTGADIM 324 (383)
T ss_pred ---HHHHHHHHCCCCEEEEECC----------CCCCCCC-------CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
T ss_conf ---9999999759988998078----------6344678-------8327899999999847998499979978679999
Q ss_pred HHHHCCCCEEEECHHHHCC----CH----HHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 9998399975452787706----97----89999999999999983899778961
Q gi|254780434|r 304 DKIMAGANLIQLYSAMIYE----GI----SLPKRIIQGLSDFLNKENEVNFENIR 350 (362)
Q Consensus 304 e~l~aGAs~VQi~Tali~~----Gp----~~~~~I~~~L~~~l~~~G~~si~e~i 350 (362)
T Consensus 325 KAlALGA~~V~iGRp~l~glaa~G~~GV~~~l~iL~~El~~~M~l~G~~si~el~ 379 (383)
T cd03332 325 KALALGAKAVLIGRPYAYGLALGGEDGVEHVLRNLLAELDLTMGLAGIRSIAELT 379 (383)
T ss_pred HHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 9997699989877899998772319999999999999999999985899977859