HHsearch alignment for GI: 254780434 and conserved domain: pfam00218

>pfam00218 IGPS Indole-3-glycerol phosphate synthase.
Probab=97.65  E-value=0.00083  Score=45.44  Aligned_cols=196  Identities=19%  Similarity=0.244  Sum_probs=108.6

Q ss_pred             EECCEECCCCE-E-ECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHH
Q ss_conf             88873359974-8-534688867798887403675241020013687899886268842555410000247777788999
Q gi|254780434|r   48 KVAGISLSNPL-G-MAAGYDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFS  125 (362)
Q Consensus        48 ~~~Gl~~~nPi-g-lAaG~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~  125 (362)
T Consensus        50 iIAEiKraSPS~G~i~~~~d-p~~iA~~Y~~~GA~aiSVLT---d-------~~~F~----------------Gs~~~L~  102 (254)
T pfam00218        50 LIAEVKKASPSKGLIREDFD-PAEIARAYEAAGASAISVLT---E-------PKYFQ----------------GSLEYLR  102 (254)
T ss_pred             EEEEEECCCCCCCCCCCCCC-HHHHHHHHHHCCCCEEEEEC---C-------CCCCC----------------CCHHHHH
T ss_conf             89877268999998689899-99999999977983799842---6-------78679----------------8799999


Q ss_pred             HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             87641000121000110454246788776555420675526983033365322110000234321111224445565531
Q gi|254780434|r  126 RLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIK  205 (362)
Q Consensus       126 ~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~  205 (362)
T Consensus       103 ~vr~~-v~lPiLr--------KDFIid~yQI~ear~~GADaiLLI~~~---------L~~~~l~~l~~~a~~l-------  157 (254)
T pfam00218       103 EVREA-VSLPVLR--------KDFIIDEYQIYEARAYGADTVLLIVAV---------LSDELLEELYEYARSL-------  157 (254)
T ss_pred             HHHHH-CCCCEEC--------CHHEEEHHHHHHHHHCCCCEEEHHHHC---------CCHHHHHHHHHHHHHH-------
T ss_conf             99986-4885111--------410465999999998088863144711---------9999999999999984-------


Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             26885178650577774888999998764498299980665553234577544632211356454246899999997408
Q gi|254780434|r  206 TGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVG  285 (362)
Q Consensus       206 ~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~  285 (362)
T Consensus       158 ---gl~~LvEvh---~~~E----l~~al~~~a~-iIGINN---Rn-L~t---------------f~vd~~~t~~L~~~ip  207 (254)
T pfam00218       158 ---GMEPLVEVH---NEEE----LERALALGAK-LIGVNN---RN-LKT---------------FEVDLNTTRRLAPMVP  207 (254)
T ss_pred             ---CCEEEEEEC---CHHH----HHHHHHCCCC-EEEECC---CC-HHH---------------HHCCHHHHHHHHHHCC
T ss_conf             ---886798868---9999----9999848997-896327---88-465---------------1005799999995589


Q ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCC-CHH
Q ss_conf             9748999678899999999998399975452787706-978
Q gi|254780434|r  286 PKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYE-GIS  325 (362)
Q Consensus       286 ~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~-Gp~  325 (362)
T Consensus       208 ~~~~~VsESGI~~~~di~~l~~~G~~~~LIGe~lm~~~dp~  248 (254)
T pfam00218       208 EDVLLVAESGISTPEDVEKLAKHGANAFLVGESLMRAPDVR  248 (254)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
T ss_conf             89879983899999999999987999999896875799989