HHsearch alignment for GI: 254780434 and conserved domain: pfam03437
>pfam03437 BtpA BtpA family. The BtpA protein is tightly associated with the thylakoid membranes, where it stabilizes the reaction centre proteins of photosystem I.
Probab=97.57 E-value=0.0037 Score=41.05 Aligned_cols=197 Identities=14% Similarity=0.189 Sum_probs=107.8
Q ss_pred HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHH
Q ss_conf 79888740367524102001368789988626884255541000024777778899987641000121000110454246
Q gi|254780434|r 69 EVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQPTSPIGINLGANKDSKD 148 (362)
Q Consensus 69 ~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~~~~pi~vsI~~~~~s~~ 148 (362)
T Consensus 33 ~ea~~l~~~GvDgvivEN~~D~Py~~~-------~--~~etvaam-------t~i~~~v~~~~-~iP~GvnvL~nd~-~a 94 (254)
T pfam03437 33 SDAMALEEGGFDAVILENYGDAPYLKT-------V--GPETVAAM-------TVIAGEVKSDV-SIPLGINVLRNDA-VA 94 (254)
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCC-------C--CHHHHHHH-------HHHHHHHHHHC-CCCEEEEEECCCC-HH
T ss_conf 999999977998899806899777467-------7--66989999-------99999998744-8873677761785-89
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE----EECCCCCCHHH
Q ss_conf 78877655542067552698303336532211000023432111122444556553126885178----65057777488
Q gi|254780434|r 149 FILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIF----LKISPDLSEEE 224 (362)
Q Consensus 149 ~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~----vKLsPd~~~~~ 224 (362)
T Consensus 95 al----ai--A~a~ga~FIRv~~~~g~-----~~~d~G~~~~~a~~~~r~R~~--l~--a~v~i~aDV~~Kh~~~l~~~~ 159 (254)
T pfam03437 95 AL----AI--AYAVGADFIRVNVLTGV-----AASDQGILEGNAGELARYRKL--LP--SRIKILADVHVKHAVHLGNRD 159 (254)
T ss_pred HH----HH--HHHHCCCEEEECCEECE-----EECCCCCCCCCHHHHHHHHHH--CC--CCCEEEEEECCCCCCCCCCCC
T ss_conf 99----99--99829976987137653-----335775315538999999997--19--995899755001254579999
Q ss_pred HHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
Q ss_conf 89999987644-98299980665553234577544632211356454246899999997408974899967889999999
Q gi|254780434|r 225 LDDIAVEVLSH-KVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDAL 303 (362)
Q Consensus 225 i~~ia~~a~~~-g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~ 303 (362)
T Consensus 160 ~~~~~~~~~~~~~aDaiivTG~~T------------------G---~~~~~~~l~~vk~~~--~~PvlvGSGvt-~~Ni~ 215 (254)
T pfam03437 160 IESAVLDTIERGLADAVILSGKTT------------------G---GEVDLEELKLAKETV--PVPVLVGSGVN-LENLE 215 (254)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCC------------------C---CCCCHHHHHHHHHHC--CCCEEEECCCC-HHHHH
T ss_conf 899999999826898999787302------------------7---999999999999626--99889957989-88999
Q ss_pred HHHHCCCCEEEECHHHHCCC
Q ss_conf 99983999754527877069
Q gi|254780434|r 304 DKIMAGANLIQLYSAMIYEG 323 (362)
Q Consensus 304 e~l~aGAs~VQi~Tali~~G 323 (362)
T Consensus 216 ~~l~~-ADG~IVGS~~K~~G 234 (254)
T pfam03437 216 ELWSI-ADGFIVGTSIKKGG 234 (254)
T ss_pred HHHHH-CCEEEEEHHEEECC
T ss_conf 99987-89999842230588