HHsearch alignment for GI: 254780434 and conserved domain: pfam04481
>pfam04481 DUF561 Protein of unknown function (DUF561). Protein of unknown function found in a cyanobacterium, and the chloroplasts of algae.
Probab=97.93 E-value=0.0013 Score=44.13 Aligned_cols=176 Identities=18% Similarity=0.092 Sum_probs=100.3
Q ss_pred HCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 00121000110454246788776555420675526983-03336532211000023432111122444556553126885
Q gi|254780434|r 132 PTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTI-NISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFV 210 (362)
Q Consensus 132 ~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEi-NiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~ 210 (362)
T Consensus 60 ~~lPiCVSaV-------ep~~f~---~aV~AGA~lvEIGNfDsFY~q-Gr~f~a~eV----L~Lt~~Tr-----~LLP~~ 119 (243)
T pfam04481 60 SNIPICVSAV-------EPELLY---EAVLAGADLVEIGNFDSFYKQ-GRVLSVCEI----IALVKETR-----KLLPHT 119 (243)
T ss_pred CCCCEEEECC-------CHHHHH---HHHHHCCCEEEECCHHHHHHC-CCEECHHHH----HHHHHHHH-----HHCCCC
T ss_conf 8998586047-------978889---999827878986453647654-766449999----99999999-----768998
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHCCCCEE
Q ss_conf 178650577774888999998764498299980665553234577544632211356454-2468999999974089748
Q gi|254780434|r 211 PIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLF-LKSTIALAKIRQRVGPKIA 289 (362)
Q Consensus 211 Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~-~~al~~i~~i~~~~~~~i~ 289 (362)
T Consensus 120 ~LsVTVPHiL~ld~Qv~LA~~L~~~GaDiIQ---TEGgts---s---~p~~~g~~glIekaapTLAaay~IS~~v--~vP 188 (243)
T pfam04481 120 PLCVTIPHILKLKEQINLAKQLESLGIDLIQ---TEGKIT---S---ISKNHCVNDLIEKSASTLASTYEISKHV--QLP 188 (243)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCEEE---CCCCCC---C---CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCC
T ss_conf 4477457635678999999999981887787---289877---7---8888425777988758899999998617--876
Q ss_pred EEEECCCCCHHHHHHHHHCCCCEEEECHHHHC-CCHHHHHHHHHHHHHHHH
Q ss_conf 99967889999999999839997545278770-697899999999999999
Q gi|254780434|r 290 IIGTGGISSTKDALDKIMAGANLIQLYSAMIY-EGISLPKRIIQGLSDFLN 339 (362)
Q Consensus 290 IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~-~Gp~~~~~I~~~L~~~l~ 339 (362)
T Consensus 189 VlcASGlS~-vT~PmAiaaGAsGVGVGSavn~Lnd~~aMva~vr~l~~al~ 238 (243)
T pfam04481 189 VICASGLSD-VTVPLAFSYGASGIGIGSAVSKLNDIEKMVNYISEIKKAIS 238 (243)
T ss_pred EEECCCCCH-HHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 675467642-14788997487710065776500249999999999999973