RPSBLAST alignment for GI: 254780434 and conserved domain: TIGR01037

>gnl|CDD|130109 TIGR01037, pyrD_sub1_fam, dihydroorotate dehydrogenase (subfamily 1) family protein. This family includes subfamily 1 dihydroorotate dehydrogenases while excluding the closely related subfamily 2 (TIGR01036). This family also includes a number of uncharacterized proteins and a domain of dihydropyrimidine dehydrogenase. The uncharacterized proteins might all be dihydroorotate dehydrogenase. Length = 300

 Score = 82.1 bits (203), Expect = 2e-16
 Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 40/322 (12%)

Query: 45  LNTKVAGISLSNPLGMAAG-YDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRL 103
           L  ++ GI   NPL +A+G      E    + + G G V   ++   P+ G   P +   
Sbjct: 1   LEVELFGIRFKNPLILASGIMGSGVESLRRIDRSGAGAVVTKSIGLEPRPGYRNPTIVET 60

Query: 104 TKDRAIINKLGFNNAGYHTVFSRLSKI--QPTSPIGINLGANKDSKDFILDYVSGIRLFF 161
                ++N +G  N G       L  +  +  +P+  ++      ++F  +    +    
Sbjct: 61  PC--GMLNAIGLQNPGVEAFLEELKPVREEFPTPLIASV-YGSSVEEFA-EVAEKLEKAP 116

Query: 162 TIASYFTINISSPN--TPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPD 219
                + +N+S P+    G+   Q  +    ++         + +K    VP+F K+SP+
Sbjct: 117 PYVDAYELNLSCPHVKGGGIAIGQDPELSADVV---------KAVKDKTDVPVFAKLSPN 167

Query: 220 LSEEELDDIAVEVLSHKVEGIIVSNTTL-------SRKGVQCSDNHEQDGGLSG---SPL 269
           +++  + +IA        +G+ + NT         + K +  +    + GGLSG    P+
Sbjct: 168 VTD--ITEIAKAAEEAGADGLTLINTLRGMKIDIKTGKPILAN----KTGGLSGPAIKPI 221

Query: 270 FLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKR 329
            L+    + K+       I IIG GGI+S +DAL+ +MAGA+ +Q+ +A+ Y G    K+
Sbjct: 222 ALRMVYDVYKMVD-----IPIIGVGGITSFEDALEFLMAGASAVQVGTAVYYRG-FAFKK 275

Query: 330 IIQGLSDFLNKENEVNFENIRG 351
           II+GL  FL  E   + E + G
Sbjct: 276 IIEGLIAFLKAEGFTSIEELIG 297