HHsearch alignment for GI: 254780435 and conserved domain: PRK11113
>PRK11113 D-alanyl-D-alanine carboxypeptidase/endopeptidase; Provisional.
Probab=99.50 E-value=2.4e-12 Score=94.69 Aligned_cols=143 Identities=15% Similarity=0.132 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHH-HCCC--CCCEEECCCCCCCCCCCCCHHH
Q ss_conf 12346777676777423589999976401-------117899999999998-7098--3534412357646222256999
Q gi|254780435|r 100 STMTLDNALKLLIVKSANDIAVAIAESLC-------KTEKKFVQHMNNTSK-NLGL--SATHFMNAHGVVQHGHYTTARD 169 (336)
Q Consensus 100 ~~~tv~dll~~~li~S~Ndaa~aLAe~i~-------Gs~~~Fv~~MN~~a~-~lG~--~~T~f~n~~Gl~~~~~~tTa~D 169 (336)
T Consensus 291 ~S~pL~eiv~~mnk~SdN~~AE~Ll~tlg~~~~~~pgs~~~g~~av~~~L~~~~Gid~~~~~i~DGSGL-SR~NriSp~~ 369 (477)
T PRK11113 291 QSAPLHDLLKIMLKKSDNMIADTLFRTIGHQRFNVPGSFRNGSDAVRQILRQQAGIDLGNTIIADGSGL-SRHNLIAPAT 369 (477)
T ss_pred ECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCC-CCCCCCCHHH
T ss_conf 388999999999853846999999999999834899988999999999999840989777777458888-8244729999
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCC-CCCEEEEEEECCHHHHHEEEEEEE-ECCEEEEEEEEC
Q ss_conf 9999898763123311012302000174478601456566-897115332124112000234564-288689999837
Q gi|254780435|r 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILG 245 (336)
Q Consensus 170 la~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll~~-~~gv~G~KTG~t~~AG~~lv~~a~-~~g~~li~Vvlg 245 (336)
T Consensus 370 l~~lL~~~~~-~~~~~~~~~sLPiaG~dGTL~~R~~~~~~~~~g~v~aKTGTL~gV-~sLAGYv~~~~G~~l~Fsi~v 445 (477)
T PRK11113 370 MMQVLQYIAQ-HDKELNLISMLPLAGYDGTLQYRGSLHQAPVDGKVSAKTGSLQGV-YNLAGFITTASGQRMAFVQFL 445 (477)
T ss_pred HHHHHHHHHH-CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC-EEEEEEEECCCCCEEEEEEEE
T ss_conf 9999999986-942788997488567788545556666776568699987435683-571799998995999999997