HHsearch alignment for GI: 254780435 and conserved domain: TIGR02214
>TIGR02214 spoVD_pbp stage V sporulation protein D; InterPro: IPR011927 This entry describes the SpoVD family of homologs of the cell division protein FtsI, a penicillin binding protein. This family is restricted to Bacillus subtilis and related Gram-positive species with known or suspected endospore formation capability. In these species, the functional equivalent of FtsI is desginated PBP-2B, a paralog of SpoVD..
Probab=91.74 E-value=0.98 Score=23.95 Aligned_cols=220 Identities=17% Similarity=0.192 Sum_probs=123.4
Q ss_pred CCEEEEEECCCCEEEEEEC---------------------------------CCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8568999978962977643---------------------------------9983075269899999999851357777
Q gi|254780435|r 28 LPYYTLLDTNTGHVIAENY---------------------------------PDHPWNPASLTKLMTAYVVFSFLKEKKA 74 (336)
Q Consensus 28 a~~~i~~d~~tG~iL~~kn---------------------------------~~~~~~~AS~tKlmTa~~~~~~i~~g~~ 74 (336)
T Consensus 248 g~~i~vMnpknGeILGM~nrP~ydpn~p~~~s~~~~~kdesa~LQ~~WRN~~v~d~yEPGS~FKiiT~~AA~~e---g~v 324 (660)
T TIGR02214 248 GVSIIVMNPKNGEILGMSNRPSYDPNDPRDKSPEVKRKDESAKLQKSWRNRVVSDAYEPGSIFKIITSSAAMEE---GIV 324 (660)
T ss_pred EEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHC---CCE
T ss_conf 58999976999717652067887877743037436054203688650188501122169847799999999732---740
Q ss_pred CCC-C------EEEECHH---HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 876-6------0351787---72003664434510123467776767774235899999764011178999999999987
Q gi|254780435|r 75 MLT-T------PITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144 (336)
Q Consensus 75 ~ld-~------~v~vs~~---~~~~~~s~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~ 144 (336)
T Consensus 325 ~le~d~FYd~G~~~vg~~~~kCWK~~GH------G-~qtF----~~vv~NSCN~GF~elG~~LG------~~~L~~Yi~~ 387 (660)
T TIGR02214 325 KLEKDKFYDDGSATVGGKKIKCWKPGGH------G-SQTF----LEVVQNSCNVGFIELGERLG------AEKLNEYIKK 387 (660)
T ss_pred ECCCCEEECCCEEEECCCEEEEECCCCC------C-CCCH----HHHHHCCCCHHHHHHHHHCC------HHHHHHHHHH
T ss_conf 0036501078414434826676768869------5-5464----78753277778998855407------6689999984
Q ss_pred CCCCCCEEECCCCCCCC---------CCCCCHHHHHHHHHH---------------HHHH-----HHHHHCCCCEEECCC
Q ss_conf 09835344123576462---------222569999999898---------------7631-----233110123020001
Q gi|254780435|r 145 LGLSATHFMNAHGVVQH---------GHYTTARDMAILSWR---------------IKTD-----FPQYMHYFQIKGLEI 195 (336)
Q Consensus 145 lG~~~T~f~n~~Gl~~~---------~~~tTa~Dla~l~~~---------------~~~~-----~p~~~~~~~~~~~~~ 195 (336)
T Consensus 388 FG-----FG~~tGIdL~GEA~GIl~n~~~v~pvdlAT~SfGQ~n~v~~iQ~~~A~~AvaNGG~L~~P~i~~e~~d~~~NG 462 (660)
T TIGR02214 388 FG-----FGSKTGIDLPGEAAGILKNLEKVGPVDLATISFGQANTVTPIQLMTAVNAVANGGKLIQPHIMKEISDKENNG 462 (660)
T ss_pred CC-----CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
T ss_conf 28-----9876886667741033413765561225433105200047789999999875166566133122021757895
Q ss_pred CCE---EE--EECCCC------------C--------CC---CCC-EEEEEEECC----HHHH-H-------EEEEEEEE
Q ss_conf 744---78--601456------------5--------66---897-115332124----1120-0-------02345642
Q gi|254780435|r 196 KGK---KY--PNTNWA------------V--------GT---FLG-ADGMKTGFT----CASG-F-------NIVASAIQ 234 (336)
Q Consensus 196 ~~~---~~--~N~N~l------------l--------~~---~~g-v~G~KTG~t----~~AG-~-------~lv~~a~~ 234 (336)
T Consensus 463 ~~~v~~~f~P~~~~~vv~~~~~~~l~~~LE~vVs~GsGk~AfIdGyrvGGKTGTAqKv~P~~G~Y~~g~YivSFvG~APa 542 (660)
T TIGR02214 463 RKVVDKKFEPEVKRKVVDKETTEKLRLALEKVVSKGSGKDAFIDGYRVGGKTGTAQKVKPEDGGYLEGEYIVSFVGFAPA 542 (660)
T ss_pred CEEEEEEECCCEEEEECCHHHHHHHHHHHHCEEECCCCCCCCCCCEEECCEECCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 15887530770123532677899998864114514777561103469577304534447888934148668998642788
Q ss_pred CC-EEEEEEEECCCCHHHHHH------HHHHHHHHHHHHCCCCCC
Q ss_conf 88-689999837898667899------999999999851453202
Q gi|254780435|r 235 GD-QSLIAVILGALDRNTRNK------VSASLLSMGFYNKTDRKK 272 (336)
Q Consensus 235 ~g-~~li~Vvlg~~~~~~r~~------~~~~Ll~~~f~~f~~~~~ 272 (336)
T Consensus 543 ~dP~v~~~V~vD~P~~~~~FGG~vAAPv~~~v~~d~l~~lGi~P~ 587 (660)
T TIGR02214 543 DDPEVAVLVVVDNPKGVEQFGGLVAAPVVGEVFNDILNYLGIKPR 587 (660)
T ss_pred CCCCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCC
T ss_conf 988479999986798972013448741468899988875576898