HHsearch alignment for GI: 254780435 and conserved domain: TIGR02214

>TIGR02214 spoVD_pbp stage V sporulation protein D; InterPro: IPR011927 This entry describes the SpoVD family of homologs of the cell division protein FtsI, a penicillin binding protein. This family is restricted to Bacillus subtilis and related Gram-positive species with known or suspected endospore formation capability. In these species, the functional equivalent of FtsI is desginated PBP-2B, a paralog of SpoVD..
Probab=91.74  E-value=0.98  Score=23.95  Aligned_cols=220  Identities=17%  Similarity=0.192  Sum_probs=123.4

Q ss_pred             CCEEEEEECCCCEEEEEEC---------------------------------CCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             8568999978962977643---------------------------------9983075269899999999851357777
Q gi|254780435|r   28 LPYYTLLDTNTGHVIAENY---------------------------------PDHPWNPASLTKLMTAYVVFSFLKEKKA   74 (336)
Q Consensus        28 a~~~i~~d~~tG~iL~~kn---------------------------------~~~~~~~AS~tKlmTa~~~~~~i~~g~~   74 (336)
T Consensus       248 g~~i~vMnpknGeILGM~nrP~ydpn~p~~~s~~~~~kdesa~LQ~~WRN~~v~d~yEPGS~FKiiT~~AA~~e---g~v  324 (660)
T TIGR02214       248 GVSIIVMNPKNGEILGMSNRPSYDPNDPRDKSPEVKRKDESAKLQKSWRNRVVSDAYEPGSIFKIITSSAAMEE---GIV  324 (660)
T ss_pred             EEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHC---CCE
T ss_conf             58999976999717652067887877743037436054203688650188501122169847799999999732---740


Q ss_pred             CCC-C------EEEECHH---HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             876-6------0351787---72003664434510123467776767774235899999764011178999999999987
Q gi|254780435|r   75 MLT-T------PITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN  144 (336)
Q Consensus        75 ~ld-~------~v~vs~~---~~~~~~s~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~  144 (336)
T Consensus       325 ~le~d~FYd~G~~~vg~~~~kCWK~~GH------G-~qtF----~~vv~NSCN~GF~elG~~LG------~~~L~~Yi~~  387 (660)
T TIGR02214       325 KLEKDKFYDDGSATVGGKKIKCWKPGGH------G-SQTF----LEVVQNSCNVGFIELGERLG------AEKLNEYIKK  387 (660)
T ss_pred             ECCCCEEECCCEEEECCCEEEEECCCCC------C-CCCH----HHHHHCCCCHHHHHHHHHCC------HHHHHHHHHH
T ss_conf             0036501078414434826676768869------5-5464----78753277778998855407------6689999984


Q ss_pred             CCCCCCEEECCCCCCCC---------CCCCCHHHHHHHHHH---------------HHHH-----HHHHHCCCCEEECCC
Q ss_conf             09835344123576462---------222569999999898---------------7631-----233110123020001
Q gi|254780435|r  145 LGLSATHFMNAHGVVQH---------GHYTTARDMAILSWR---------------IKTD-----FPQYMHYFQIKGLEI  195 (336)
Q Consensus       145 lG~~~T~f~n~~Gl~~~---------~~~tTa~Dla~l~~~---------------~~~~-----~p~~~~~~~~~~~~~  195 (336)
T Consensus       388 FG-----FG~~tGIdL~GEA~GIl~n~~~v~pvdlAT~SfGQ~n~v~~iQ~~~A~~AvaNGG~L~~P~i~~e~~d~~~NG  462 (660)
T TIGR02214       388 FG-----FGSKTGIDLPGEAAGILKNLEKVGPVDLATISFGQANTVTPIQLMTAVNAVANGGKLIQPHIMKEISDKENNG  462 (660)
T ss_pred             CC-----CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
T ss_conf             28-----9876886667741033413765561225433105200047789999999875166566133122021757895


Q ss_pred             CCE---EE--EECCCC------------C--------CC---CCC-EEEEEEECC----HHHH-H-------EEEEEEEE
Q ss_conf             744---78--601456------------5--------66---897-115332124----1120-0-------02345642
Q gi|254780435|r  196 KGK---KY--PNTNWA------------V--------GT---FLG-ADGMKTGFT----CASG-F-------NIVASAIQ  234 (336)
Q Consensus       196 ~~~---~~--~N~N~l------------l--------~~---~~g-v~G~KTG~t----~~AG-~-------~lv~~a~~  234 (336)
T Consensus       463 ~~~v~~~f~P~~~~~vv~~~~~~~l~~~LE~vVs~GsGk~AfIdGyrvGGKTGTAqKv~P~~G~Y~~g~YivSFvG~APa  542 (660)
T TIGR02214       463 RKVVDKKFEPEVKRKVVDKETTEKLRLALEKVVSKGSGKDAFIDGYRVGGKTGTAQKVKPEDGGYLEGEYIVSFVGFAPA  542 (660)
T ss_pred             CEEEEEEECCCEEEEECCHHHHHHHHHHHHCEEECCCCCCCCCCCEEECCEECCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf             15887530770123532677899998864114514777561103469577304534447888934148668998642788


Q ss_pred             CC-EEEEEEEECCCCHHHHHH------HHHHHHHHHHHHCCCCCC
Q ss_conf             88-689999837898667899------999999999851453202
Q gi|254780435|r  235 GD-QSLIAVILGALDRNTRNK------VSASLLSMGFYNKTDRKK  272 (336)
Q Consensus       235 ~g-~~li~Vvlg~~~~~~r~~------~~~~Ll~~~f~~f~~~~~  272 (336)
T Consensus       543 ~dP~v~~~V~vD~P~~~~~FGG~vAAPv~~~v~~d~l~~lGi~P~  587 (660)
T TIGR02214       543 DDPEVAVLVVVDNPKGVEQFGGLVAAPVVGEVFNDILNYLGIKPR  587 (660)
T ss_pred             CCCCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCC
T ss_conf             988479999986798972013448741468899988875576898