HHsearch alignment for GI: 254780435 and conserved domain: pfam02113
>pfam02113 Peptidase_S13 D-Ala-D-Ala carboxypeptidase 3 (S13) family.
Probab=98.82 E-value=2.4e-07 Score=64.22 Aligned_cols=147 Identities=16% Similarity=0.164 Sum_probs=106.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHCCCC--CCEEECCCCCCCCCCCCCH
Q ss_conf 451012346777676777423589999976401------11789999999999870983--5344123576462222569
Q gi|254780435|r 96 FKKGSTMTLDNALKLLIVKSANDIAVAIAESLC------KTEKKFVQHMNNTSKNLGLS--ATHFMNAHGVVQHGHYTTA 167 (336)
Q Consensus 96 l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~------Gs~~~Fv~~MN~~a~~lG~~--~T~f~n~~Gl~~~~~~tTa 167 (336)
T Consensus 223 l~~~~S~pL~~iv~~m~k~S~N~~AE~L~~~lg~~~~~~~s~~~g~~~v~~~L~~~gi~~~~~~l~DGSGL-Sr~n~is~ 301 (383)
T pfam02113 223 LAVHQSAPLSDLLKKMMKKSDNLIAESLFREIGVAIKRPGSFEAGADAVRSILSTAGIDTANLVLRDGSGL-SRHNLVTA 301 (383)
T ss_pred EEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCC-CCCCCCCH
T ss_conf 99996979999999997418569999999999986279988899999999999974999556478448988-73345499
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEC---CCCCC-CCCCEEEEEEECCHHHHHEEEEEEE-ECCEEEEEE
Q ss_conf 999999898763123311012302000174478601---45656-6897115332124112000234564-288689999
Q gi|254780435|r 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT---NWAVG-TFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAV 242 (336)
Q Consensus 168 ~Dla~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~---N~ll~-~~~gv~G~KTG~t~~AG~~lv~~a~-~~g~~li~V 242 (336)
T Consensus 302 ~~l~~lL~~~~-~~~~~~~~~~sLPvaG~dGTL~~r~~~~~~~~~~~~G~v~aKTGTL~~-V~sLaGyv~~~~G~~l~Fs 379 (383)
T pfam02113 302 ATLAQLLQAIA-DQPALQALLDSLPVAGESGTLVGGTLRNRFKGTPAVGKVRAKTGSLTG-VYSLAGYVTTDSGRKLAFS 379 (383)
T ss_pred HHHHHHHHHHH-HCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC-CEEEEEEEECCCCCEEEEE
T ss_conf 99999999998-694388999839826888855555555544577756759999850069-5794799997998999999
Q ss_pred EEC
Q ss_conf 837
Q gi|254780435|r 243 ILG 245 (336)
Q Consensus 243 vlg 245 (336)
T Consensus 380 i~~ 382 (383)
T pfam02113 380 FIS 382 (383)
T ss_pred EEE
T ss_conf 995