HHsearch results for GI: 254780435 and protein with PDBid: 1alq_A
>1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1
Probab=99.96 E-value=6.6e-29 Score=194.29 Aligned_cols=191 Identities=15% Similarity=0.090 Sum_probs=147.2
Q ss_pred EEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 68999978962977643998307526989999999985135777787660351787720036644345101234677767
Q gi|254780435|r 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109 (336)
Q Consensus 30 ~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l~~g~~~tv~dll~ 109 (336)
+..++|.+||+++ +.|+|+++||||++|+|+++.++++++.|+ ||+.++++++....+++.+...+|+.+|++||+.
T Consensus 61 gv~~~D~~tG~~~-~~n~d~~~~~ASt~Kl~~a~~~l~~v~~g~--ld~~v~i~~~~~~~~~~~~~~~~g~~~tl~dll~ 137 (266)
T 1alq_A 61 GVYALDTKSGKEV-KFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKALIE 137 (266)
T ss_dssp EEEEEETTTCCEE-EESTTSCEECGGGHHHHHHHHHHHSSCGGG--TTCEEEECGGGCCSSCTTGGGGTTEEEEHHHHHH
T ss_pred EEEEEECCCCCEE-EECCCCCCCCHHHHHHHHHHHHHHHHHCCC--CCCEEEECHHHHHCCCCCCCCCCCCCEEHHHHHH
T ss_conf 9999999999888-888998353478999999999999720478--7751675388863369731046897235999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCC------CCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67774235899999764011178999999999987098353441235764------622225699999998987631233
Q gi|254780435|r 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------QHGHYTTARDMAILSWRIKTDFPQ 183 (336)
Q Consensus 110 ~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~------~~~~~tTa~Dla~l~~~~~~~~p~ 183 (336)
+|++.|+|+||++|++++|| .+.||++++++|+++|++.+..+.. +..|++||+||+++.+++... +.
T Consensus 138 ~mi~~SdN~Aa~~L~~~lGg-----~~~~~~~~~~~G~~~t~l~~~~~~~~~~~~~~~~n~tTa~d~a~ll~~l~~~-~~ 211 (266)
T 1alq_A 138 ASMTYSDNTANNKIIKEIGG-----IKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIAN-GK 211 (266)
T ss_dssp HHHHHCCHHHHHHHHHHHTC-----HHHHHHHHHHTTCCSCCCCCCTTGGGCCCTTCCTTEECHHHHHHHHHHHTTS-SS
T ss_pred HHHHCCHHHHHHHHHHHHCC-----CHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CC
T ss_conf 87754879999999999776-----1689999997473227626777655567778744444999999999999857-87
Q ss_pred HHCCCCEEECCCCCEEEEECCCCCCC-C-C-CEEEEEEECCHHHH-HEEEE
Q ss_conf 11012302000174478601456566-8-9-71153321241120-00234
Q gi|254780435|r 184 YMHYFQIKGLEIKGKKYPNTNWAVGT-F-L-GADGMKTGFTCASG-FNIVA 230 (336)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~N~N~ll~~-~-~-gv~G~KTG~t~~AG-~~lv~ 230 (336)
+..-....-..+- ....+.|.+|.. . + ...|.|||++...| +|-++
T Consensus 212 ls~~~~~~l~~~m-~~~~~~~~~l~~~lP~~~~Va~KTGt~~~~G~~~D~a 261 (266)
T 1alq_A 212 LSKENKKFLLDLM-LNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVA 261 (266)
T ss_dssp CCHHHHHHHHHHH-HTCGGGTTTHHHHSCTTCEEEEEEEECSSTTCEEEEE
T ss_pred CCHHHHHHHHHHH-HCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEE
T ss_conf 8999999999999-6396443005543999988999650577677621599