HHsearch results for GI: 254780435 and protein with PDBid: 1alq_A

>1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1
Probab=99.96  E-value=6.6e-29  Score=194.29  Aligned_cols=191  Identities=15%  Similarity=0.090  Sum_probs=147.2

Q ss_pred             EEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             68999978962977643998307526989999999985135777787660351787720036644345101234677767
Q gi|254780435|r   30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK  109 (336)
Q Consensus        30 ~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l~~g~~~tv~dll~  109 (336)
                      +..++|.+||+++ +.|+|+++||||++|+|+++.++++++.|+  ||+.++++++....+++.+...+|+.+|++||+.
T Consensus        61 gv~~~D~~tG~~~-~~n~d~~~~~ASt~Kl~~a~~~l~~v~~g~--ld~~v~i~~~~~~~~~~~~~~~~g~~~tl~dll~  137 (266)
T 1alq_A           61 GVYALDTKSGKEV-KFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKALIE  137 (266)
T ss_dssp             EEEEEETTTCCEE-EESTTSCEECGGGHHHHHHHHHHHSSCGGG--TTCEEEECGGGCCSSCTTGGGGTTEEEEHHHHHH
T ss_pred             EEEEEECCCCCEE-EECCCCCCCCHHHHHHHHHHHHHHHHHCCC--CCCEEEECHHHHHCCCCCCCCCCCCCEEHHHHHH
T ss_conf             9999999999888-888998353478999999999999720478--7751675388863369731046897235999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCC------CCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             67774235899999764011178999999999987098353441235764------622225699999998987631233
Q gi|254780435|r  110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------QHGHYTTARDMAILSWRIKTDFPQ  183 (336)
Q Consensus       110 ~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~------~~~~~tTa~Dla~l~~~~~~~~p~  183 (336)
                      +|++.|+|+||++|++++||     .+.||++++++|+++|++.+..+..      +..|++||+||+++.+++... +.
T Consensus       138 ~mi~~SdN~Aa~~L~~~lGg-----~~~~~~~~~~~G~~~t~l~~~~~~~~~~~~~~~~n~tTa~d~a~ll~~l~~~-~~  211 (266)
T 1alq_A          138 ASMTYSDNTANNKIIKEIGG-----IKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIAN-GK  211 (266)
T ss_dssp             HHHHHCCHHHHHHHHHHHTC-----HHHHHHHHHHTTCCSCCCCCCTTGGGCCCTTCCTTEECHHHHHHHHHHHTTS-SS
T ss_pred             HHHHCCHHHHHHHHHHHHCC-----CHHHHHHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CC
T ss_conf             87754879999999999776-----1689999997473227626777655567778744444999999999999857-87


Q ss_pred             HHCCCCEEECCCCCEEEEECCCCCCC-C-C-CEEEEEEECCHHHH-HEEEE
Q ss_conf             11012302000174478601456566-8-9-71153321241120-00234
Q gi|254780435|r  184 YMHYFQIKGLEIKGKKYPNTNWAVGT-F-L-GADGMKTGFTCASG-FNIVA  230 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~N~N~ll~~-~-~-gv~G~KTG~t~~AG-~~lv~  230 (336)
                      +..-....-..+- ....+.|.+|.. . + ...|.|||++...| +|-++
T Consensus       212 ls~~~~~~l~~~m-~~~~~~~~~l~~~lP~~~~Va~KTGt~~~~G~~~D~a  261 (266)
T 1alq_A          212 LSKENKKFLLDLM-LNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVA  261 (266)
T ss_dssp             CCHHHHHHHHHHH-HTCGGGTTTHHHHSCTTCEEEEEEEECSSTTCEEEEE
T ss_pred             CCHHHHHHHHHHH-HCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEE
T ss_conf             8999999999999-6396443005543999988999650577677621599