HHsearch results for GI: 254780435 and protein with PDBid: 2wad_A
>2wad_A Penicillin-binding protein 2B; peptidoglycan synthesis, transmembrane, antibiotic resistance, cell shape, peptidoglycan, cell membrane; 2.18A {Streptococcus pneumoniae} PDB: 2wae_A 2waf_A
Probab=98.52 E-value=4.8e-05 Score=48.91 Aligned_cols=143 Identities=17% Similarity=0.120 Sum_probs=90.7
Q ss_pred CEEEEEECCCCEEEEEEC-----------------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCC
Q ss_conf 568999978962977643-----------------998307526989999999985135777787660351787720036
Q gi|254780435|r 29 PYYTLLDTNTGHVIAENY-----------------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91 (336)
Q Consensus 29 ~~~i~~d~~tG~iL~~kn-----------------~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~ 91 (336)
-+++++|.+||+||.--+ ....++|+|+-|.+|++.+|| +|.+++++.+.-...... +.
T Consensus 343 ~~~vv~dp~tG~IlAm~~~~~~~~~~~~~~~~n~a~~~~~~PGStfKp~~~~aALe---~g~~~~~~~~~d~~~~~~-~~ 418 (680)
T 2wad_A 343 VYAVALNPQTGAVLSMSGLKHDLKTGELTPDSLGTVTNVFVPGSVVKAATISSGWE---NGVLSGNQTLTDQPIVFQ-GS 418 (680)
T ss_dssp EEEEEECTTTCBEEEEEEEEECTTTCCEEECTTHHHHCCBCCGGGGHHHHHHHHHH---TTSCCSSCCEEECCBCBT-TS
T ss_pred EEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH---CCCCCCCCEEECCCCCCC-CC
T ss_conf 69999966658044136763122100134544201111357875216788999997---089998735713784223-68
Q ss_pred CCC--CCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHHCCCCCCEEEC
Q ss_conf 644--34510---1234677767677742358999997640111------------789999999999870983534412
Q gi|254780435|r 92 SNS--TFKKG---STMTLDNALKLLIVKSANDIAVAIAESLCKT------------EKKFVQHMNNTSKNLGLSATHFMN 154 (336)
Q Consensus 92 s~~--~l~~g---~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs------------~~~Fv~~MN~~a~~lG~~~T~f~n 154 (336)
... .-..| ..+|+++. |..|.|-.+.-+|+.++|. .+.-++.+.+.++.+|+....-.+
T Consensus 419 ~~~~~~~~~~~~~g~itl~~A----l~~S~N~~~~~~a~~~~~~~~~~~~~~~~~~~~~g~~kl~~~~~~~G~~~~~~i~ 494 (680)
T 2wad_A 419 APIYSWYKLAYGSFPITAVEA----LEYSSNAYVVQTALGIMGQTYQPNMFVGTSNLESAMGKLRSTFGEYGLGSATGID 494 (680)
T ss_dssp CCBCCTTTTTTCSEEECHHHH----HHHTCHHHHHHHHHHHTTCCCCTTBCCCCTTHHHHHHHHHHHHHHTTSSSCCCCS
T ss_pred CCCCCCCCCCCCCCCCCHHHH----HHCCCCHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 864210136778877205636----4507559999999875024454033304267876546889999970998656886
Q ss_pred ----CCCC-CC-------------CCCCCCHHHHHHHHHHHHH
Q ss_conf ----3576-46-------------2222569999999898763
Q gi|254780435|r 155 ----AHGV-VQ-------------HGHYTTARDMAILSWRIKT 179 (336)
Q Consensus 155 ----~~Gl-~~-------------~~~~tTa~Dla~l~~~~~~ 179 (336)
..|+ |+ .+...|+-.||.....+..
T Consensus 495 lp~E~~G~~~~~~~~~~~~~~~~Gqg~~vTPlqma~aya~iaN 537 (680)
T 2wad_A 495 LPDESTGLVPKEYNFANFITNAFGQFDNYTPMQLAQYVATIAN 537 (680)
T ss_dssp SSCCCCCBCCSSCCHHHHHHHTTTSSSBBCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 6544567677523333223223577677899999999999975