HHsearch results for GI: 254780435 and protein with PDBid: 3a3j_A
>3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae}
Probab=100.00 E-value=0 Score=556.02 Aligned_cols=312 Identities=28% Similarity=0.352 Sum_probs=262.8
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH---CCCCCCCCC
Q ss_conf 78754478568999978962977643998307526989999999985135777787660351787720---036644345
Q gi|254780435|r 21 SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFK 97 (336)
Q Consensus 21 ~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~---~~~s~~~l~ 97 (336)
..+|.+.|++||+||++||+|||+||+|+++||||+|||||+|++++++++|+++||++|++|+.++. .++|+++|+
T Consensus 2 ~~pP~i~A~saiv~d~~tG~iL~~kn~~~~~~pASlTKlMTa~v~l~~i~~g~l~~~~~vtvs~~~~~~~~~~~s~~~l~ 81 (344)
T 3a3j_A 2 VTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLD 81 (344)
T ss_dssp CCCCCCCSSEEEEEETTTCCEEEEESTTSCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCTTTCGGGCTTSCCCCCC
T ss_pred CCCCCCCCCEEEEEECCCCCEEHEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCEEEEC
T ss_conf 89985561399999999996902069098885399999999999999997499986788996499985058987325334
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 10123467776767774235899999764011178999999999987098353441235764622225699999998987
Q gi|254780435|r 98 KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177 (336)
Q Consensus 98 ~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~~~~tTa~Dla~l~~~~ 177 (336)
+|+++|++|||++||++||||||++|||+++||+++||++||++|++|||+||||.|||||++++|+|||+|||+|++++
T Consensus 82 ~ge~~tv~dLL~~lll~S~NdAA~alAe~i~Gs~~~Fv~~MN~~A~~lG~~~T~f~np~Gl~~~~~~ttA~Dla~l~~~~ 161 (344)
T 3a3j_A 82 LNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHI 161 (344)
T ss_dssp TTCEEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCSSCBCSSSSCCCCTTCBBCHHHHHHHHHHH
T ss_pred CCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCHHHHHHHHHHH
T ss_conf 89768899998777651388099999988089899999999999998388535887453235888766599999999998
Q ss_pred HHHHHHHHCCCCEEECCCCCEEEEECCCCC-CCCCCEEEEEEECCHHHHHEEEEEEE-ECCEEEEEEEECCCCHHHHHHH
Q ss_conf 631233110123020001744786014565-66897115332124112000234564-2886899998378986678999
Q gi|254780435|r 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILGALDRNTRNKV 255 (336)
Q Consensus 178 ~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll-~~~~gv~G~KTG~t~~AG~~lv~~a~-~~g~~li~Vvlg~~~~~~r~~~ 255 (336)
++++|.+..+++.+.+.+.+..+.|+|.++ +.+.|++|+|||||++||+|+++++. ++|+++|+||||+++...||.|
T Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~KTG~t~~ag~~~~~~a~~~~~~~ii~Vvlg~~~~~~r~~d 241 (344)
T 3a3j_A 162 IRDLPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVE 241 (344)
T ss_dssp HHHCHHHHGGGGCCEEEETTEEEECSCGGGGCTTSEEEEEEEEEETTTEEEEEEEEECTTCCEEEEEEEEESSHHHHHHH
T ss_pred HCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHH
T ss_conf 54874114565588776511321355531346776744236554003677259998505860899999779982058999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCCC-CCCCEE--ECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 999999998514532023455455---201455542346-543202--11345543233211344445442681120001
Q gi|254780435|r 256 SASLLSMGFYNKTDRKKINYIIKD---FYQQNLSNEVPN-ISEEVC--TTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329 (336)
Q Consensus 256 ~~~Ll~~~f~~f~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~ 329 (336)
+++|++|+|++|+..+++.+.... ..+......+.. ...++. .+............ .......+|+++++.+
T Consensus 242 ~~~L~~~~f~~y~~~~l~~~g~~i~~~~v~~g~~~~v~l~~~~d~~~~vpk~~~~~i~~~i~--~~~~~l~APVkkG~~V 319 (344)
T 3a3j_A 242 SKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFMDHFITIPKGKQSEVKARYE--LADKNLQAPLAKGQVI 319 (344)
T ss_dssp HHHHHHHHHHHEEEEEEECTTCEEEEEEEESSSSSEEEEECSSCEEEEEETTCTTTCEEEEE--ESSSSEESCBCTTCEE
T ss_pred HHHHHHHHHHHCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEE--ECCCCCCCCCCCCCEE
T ss_conf 99999998853479996048973218888458533799997577799998998664599999--7788652677879899
Q ss_pred CCEEC
Q ss_conf 33010
Q gi|254780435|r 330 KNKIT 334 (336)
Q Consensus 330 ~~~i~ 334 (336)
|....
T Consensus 320 G~l~v 324 (344)
T 3a3j_A 320 GKVVY 324 (344)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99999