HHsearch results for GI: 254780435 and protein with PDBid: 3mfd_A
>3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis}
Probab=100.00 E-value=0 Score=543.36 Aligned_cols=250 Identities=26% Similarity=0.280 Sum_probs=233.4
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCH
Q ss_conf 78754478568999978962977643998307526989999999985135777787660351787720036644345101
Q gi|254780435|r 21 SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100 (336)
Q Consensus 21 ~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l~~g~ 100 (336)
.+++.+.|++|||||++||+|||+||+|+++||||+|||||+|+++|++ +||++|+||++++..++|+++|++|+
T Consensus 2 ~~~~~i~A~saiv~D~~tG~iL~~kn~~~~~~pASlTKlmT~~v~le~~-----~l~~~v~vs~~a~~~~~s~~~l~~g~ 76 (334)
T 3mfd_A 2 NAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLAIESG-----KMDQTVTVSANAVRTEGSAIYLTEGQ 76 (334)
T ss_dssp --CCCCSCSEEEEEETTTCCEEEEESTTCCBCCGGGGHHHHHHHHHHTT-----CTTSEEECCHHHHHCCSSCCCCCTTC
T ss_pred CCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC-----CCCCEEEECHHHHCCCCCEEEECCCC
T ss_conf 9886763549999999999890206909989568899999999999588-----99986998899943799535354898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCC-CCCCCCHHHHHHHHHHHHH
Q ss_conf 234677767677742358999997640111789999999999870983534412357646-2222569999999898763
Q gi|254780435|r 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKT 179 (336)
Q Consensus 101 ~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~-~~~~tTa~Dla~l~~~~~~ 179 (336)
++|++|||++||++|+||||++|||+++||+++||++||++|++|||++|||.|||||++ ++|+|||+||++|++++++
T Consensus 77 ~~tv~dLl~~~li~SaNdAA~aLAe~i~Gs~~~Fv~~MN~~A~~lG~~~T~f~n~~GL~~~~~~~sTa~Dla~l~~~~~~ 156 (334)
T 3mfd_A 77 KVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILTKYAMK 156 (334)
T ss_dssp EEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHTCTTCBCSSSSCCSCSSSCBBCHHHHHHHHHHHTT
T ss_pred EEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 76099999999876357799999987269789999999999999588576014675675866777569999999986405
Q ss_pred HHHHHHCCCCEEECCCCC--EEEEECCCCCCC-CCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHHHHHHH
Q ss_conf 123311012302000174--478601456566-89711533212411200023456428868999983789866789999
Q gi|254780435|r 180 DFPQYMHYFQIKGLEIKG--KKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256 (336)
Q Consensus 180 ~~p~~~~~~~~~~~~~~~--~~~~N~N~ll~~-~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~r~~~~ 256 (336)
+|+|.++++++.+++++ ..+.|+|+||+. |+|++|+|||||++|||||+++++|||+|+|+||||+++ ||.|+
T Consensus 157 -~p~~~~i~~~~~~~~~~~~~~~~N~N~lL~~~~~~~~G~KTG~T~~AG~~lv~~a~~~g~~li~Vvlg~~~---~~~d~ 232 (334)
T 3mfd_A 157 -LKDYQKISGTKIYKAETMESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDPN---DWDDH 232 (334)
T ss_dssp -SHHHHHHHTCSEEECSSSSCEEECCCHHHHTTCTTEEEEEEEEETTTEEEEEEEEEETTEEEEEEEESCTT---HHHHH
T ss_pred -CHHHHHHCCEEEEECCCCCCEEECCCCHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCEEEEEEEECCCC---CHHHH
T ss_conf -72244214168997267552213347400204776252485257888841789999999899999927886---27799
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999998514532023455455
Q gi|254780435|r 257 ASLLSMGFYNKTDRKKINYIIKD 279 (336)
Q Consensus 257 ~~Ll~~~f~~f~~~~~~~~~~~~ 279 (336)
++|++|+|++|....+..++..+
T Consensus 233 ~~Ll~~~f~~~~~~~l~~~g~i~ 255 (334)
T 3mfd_A 233 MKMFNYVFEHYQTYLIAKKGDIP 255 (334)
T ss_dssp HHHHHHHHHHEEEEEEECSEECG
T ss_pred HHHHHHHHHHCEEEEECCCCCCC
T ss_conf 99999998626799820389733