HHsearch results for GI: 254780435 and protein with PDBid: 3mfd_A

>3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis}
Probab=100.00  E-value=0  Score=543.36  Aligned_cols=250  Identities=26%  Similarity=0.280  Sum_probs=233.4

Q ss_pred             CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCH
Q ss_conf             78754478568999978962977643998307526989999999985135777787660351787720036644345101
Q gi|254780435|r   21 SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS  100 (336)
Q Consensus        21 ~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l~~g~  100 (336)
                      .+++.+.|++|||||++||+|||+||+|+++||||+|||||+|+++|++     +||++|+||++++..++|+++|++|+
T Consensus         2 ~~~~~i~A~saiv~D~~tG~iL~~kn~~~~~~pASlTKlmT~~v~le~~-----~l~~~v~vs~~a~~~~~s~~~l~~g~   76 (334)
T 3mfd_A            2 NAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLAIESG-----KMDQTVTVSANAVRTEGSAIYLTEGQ   76 (334)
T ss_dssp             --CCCCSCSEEEEEETTTCCEEEEESTTCCBCCGGGGHHHHHHHHHHTT-----CTTSEEECCHHHHHCCSSCCCCCTTC
T ss_pred             CCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC-----CCCCEEEECHHHHCCCCCEEEECCCC
T ss_conf             9886763549999999999890206909989568899999999999588-----99986998899943799535354898


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCC-CCCCCCHHHHHHHHHHHHH
Q ss_conf             234677767677742358999997640111789999999999870983534412357646-2222569999999898763
Q gi|254780435|r  101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKT  179 (336)
Q Consensus       101 ~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~-~~~~tTa~Dla~l~~~~~~  179 (336)
                      ++|++|||++||++|+||||++|||+++||+++||++||++|++|||++|||.|||||++ ++|+|||+||++|++++++
T Consensus        77 ~~tv~dLl~~~li~SaNdAA~aLAe~i~Gs~~~Fv~~MN~~A~~lG~~~T~f~n~~GL~~~~~~~sTa~Dla~l~~~~~~  156 (334)
T 3mfd_A           77 KVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILTKYAMK  156 (334)
T ss_dssp             EEEHHHHHHHHHHHCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHTCTTCBCSSSSCCSCSSSCBBCHHHHHHHHHHHTT
T ss_pred             EEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             76099999999876357799999987269789999999999999588576014675675866777569999999986405


Q ss_pred             HHHHHHCCCCEEECCCCC--EEEEECCCCCCC-CCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHHHHHHH
Q ss_conf             123311012302000174--478601456566-89711533212411200023456428868999983789866789999
Q gi|254780435|r  180 DFPQYMHYFQIKGLEIKG--KKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS  256 (336)
Q Consensus       180 ~~p~~~~~~~~~~~~~~~--~~~~N~N~ll~~-~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~r~~~~  256 (336)
                       +|+|.++++++.+++++  ..+.|+|+||+. |+|++|+|||||++|||||+++++|||+|+|+||||+++   ||.|+
T Consensus       157 -~p~~~~i~~~~~~~~~~~~~~~~N~N~lL~~~~~~~~G~KTG~T~~AG~~lv~~a~~~g~~li~Vvlg~~~---~~~d~  232 (334)
T 3mfd_A          157 -LKDYQKISGTKIYKAETMESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDPN---DWDDH  232 (334)
T ss_dssp             -SHHHHHHHTCSEEECSSSSCEEECCCHHHHTTCTTEEEEEEEEETTTEEEEEEEEEETTEEEEEEEESCTT---HHHHH
T ss_pred             -CHHHHHHCCEEEEECCCCCCEEECCCCHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCEEEEEEEECCCC---CHHHH
T ss_conf             -72244214168997267552213347400204776252485257888841789999999899999927886---27799


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             99999998514532023455455
Q gi|254780435|r  257 ASLLSMGFYNKTDRKKINYIIKD  279 (336)
Q Consensus       257 ~~Ll~~~f~~f~~~~~~~~~~~~  279 (336)
                      ++|++|+|++|....+..++..+
T Consensus       233 ~~Ll~~~f~~~~~~~l~~~g~i~  255 (334)
T 3mfd_A          233 MKMFNYVFEHYQTYLIAKKGDIP  255 (334)
T ss_dssp             HHHHHHHHHHEEEEEEECSEECG
T ss_pred             HHHHHHHHHHCEEEEECCCCCCC
T ss_conf             99999998626799820389733