RPSBLAST alignment of GI: 254780435 and protein with PDBid: 1e25
>1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1 Length = 282
Score = 117 bits (293), Expect = 4e-27
Identities = 37/279 (13%), Positives = 87/279 (31%), Gaps = 40/279 (14%)
Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SE 88
+ + + N P + S+ KL A +V + + K L + +++ +
Sbjct: 24 VWGPDDLEPLLIN-PFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTW 82
Query: 89 YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
P + ++ + L+ + S N + E + +++ +++G+
Sbjct: 83 APIMKAYQGDEFSVPVQQLLQYSVSHSDNVACDLLFELVG-----GPAALHDYIQSMGIK 137
Query: 149 ATHF------MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF-QIKGLEIKGKKYP 201
T M+A VQ+ ++T+ + A + + + + ++ P
Sbjct: 138 ETAVVANEAQMHADDQVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGP 197
Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG------DQSLIAVIL---GALDRNTR 252
+ KTG + A+ G + L+ + A T
Sbjct: 198 ERLKGLLPAGTVVAHKTGTSQIKAGKTAATNDLGIILLPDGRPLLVAVFVKDSAESSRTN 257
Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
+ A + + F + LS PN
Sbjct: 258 EAIIAQVAQTAY--------------QFELKKLSALSPN 282