RPSBLAST alignment of GI: 254780435 and protein with PDBid: 1es5
>1es5_A DD-transpeptidase; penicillin-binding, serine peptidase, beta-lactamase, hydrolase carboxypeptidase; 1.40A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1skf_A 1es2_A 1j9m_A 1esi_A 1es3_A 1es4_A Length = 262
Score = 182 bits (464), Expect = 7e-47
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 24/254 (9%)
Query: 31 YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY- 89
++ TG + D + S TK+MTA VV L + L +TI K S+Y
Sbjct: 11 GYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVV---LAQSNLNLDAKVTIQKAYSDYV 67
Query: 90 ---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------CKTEKKFVQHMNN 140
S + G +T+ L L++ S D A A+A+ K F+ MN
Sbjct: 68 VANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKSFIGKMNT 127
Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK--------- 191
+ NLGL THF + G+ +Y+T RD+ ++ + + + K
Sbjct: 128 AATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIASSAMKN-STFRTVVKTKAYTAKTVTK 186
Query: 192 -GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
G + NTN + ++ GA G+KTG + + +V +A +G +++I +L +
Sbjct: 187 TGSIRTMDTWKNTNGLLSSYSGAIGVKTGAGPEAKYCLVFAATRGGKTVIGTVLASTSIP 246
Query: 251 TRNKVSASLLSMGF 264
R + +++ GF
Sbjct: 247 ARESDATKIMNYGF 260