RPSBLAST alignment of GI: 254780435 and protein with PDBid: 1tvf

>1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1 Length = 369
 Score =  139 bits (350), Expect = 1e-33
 Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 39/292 (13%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA-- 86
           P   +  + TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++     
Sbjct: 35  PTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYI 94

Query: 87  --SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +    SN+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K 
Sbjct: 95  MSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKA 154

Query: 145 LGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           +G+  THF+N  G                Q    TTARD AIL   +  + P+ + + + 
Sbjct: 155 IGMKNTHFVNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQ 214

Query: 191 KGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                    Y   N+++     +  G DG+KTG +  + +N   +  +G   +  VI+GA
Sbjct: 215 LAPTTHAVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGA 274

Query: 247 LDRN------TRNKVSASLLSMGFYNKTDRK-----------KINYIIKDFY 281
            D         RN +  +L+   F      K           K  Y+  D Y
Sbjct: 275 GDYKNLGGEKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLY 326