HHsearch alignment for GI: 254780436 and conserved domain: COG2956
>COG2956 Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism].
Probab=99.08 E-value=2.5e-11 Score=78.37 Aligned_cols=216 Identities=18% Similarity=0.182 Sum_probs=139.1
Q ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCHHHCCCCC
Q ss_conf 999819989999999999981689989999999999972985222211111111111111-----112110000000112
Q gi|254780436|r 44 SLFPSMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYY-----KVYANRALIRYKMGD 118 (298)
Q Consensus 44 ~~~~~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-----~~~~~~~~~~~~~~~ 118 (298)
T Consensus 44 NfLLs~Q~dKAvdlF~e~l~~d~~t~e~~ltLGnLfRsRGEvDRAIRiHQ~L~~-spdlT~~qr~lAl~qL~~Dym~aGl 122 (389)
T COG2956 44 NFLLSNQPDKAVDLFLEMLQEDPETFEAHLTLGNLFRSRGEVDRAIRIHQTLLE-SPDLTFEQRLLALQQLGRDYMAAGL 122 (389)
T ss_pred HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 898616963699999999835815678988988898863508899999998852-8998668999999999899998564
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22211111122221111111222222222221111111111121111222222222222222211111111122212111
Q gi|254780436|r 119 VPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQ 198 (298)
Q Consensus 119 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (298)
T Consensus 123 ~DRAE~~f~~L~de~efa~~AlqqL------------------------------------l~IYQ~treW~KAIe~A~~ 166 (389)
T COG2956 123 LDRAEDIFNQLVDEGEFAEGALQQL------------------------------------LNIYQATREWEKAIDVAER 166 (389)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHH------------------------------------HHHHHHHHHHHHHHHHHHH
T ss_conf 6689999999734634328999999------------------------------------9999983689999999999
Q ss_pred CCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 111112----2212222222222211111111222111223233388899999999999849989999999999861799
Q gi|254780436|r 199 AISLYS----SISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSR 274 (298)
Q Consensus 199 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~ 274 (298)
T Consensus 167 L~k~~~q~~~~eIAqfyCELAq~~~~~~~~d~A~~~l~kAlqa~~~cvRAsi~lG~v~~~~g~y~~AV~~~e~v~~Qn~~ 246 (389)
T COG2956 167 LVKLGGQTYRVEIAQFYCELAQQALASSDVDRARELLKKALQADKKCVRASIILGRVELAKGDYQKAVEALERVLEQNPE 246 (389)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHH
T ss_conf 99718852125899999999999740311899999999998628200103545438887526669999999999984957
Q ss_pred CH-HHHHHHHHHHHHHHHHHHHH
Q ss_conf 98-99999999999974288874
Q gi|254780436|r 275 YY-RAKNGILRISQDLSSTVNEV 296 (298)
Q Consensus 275 ~~-~a~~~la~i~~~lg~~~~~~ 296 (298)
T Consensus 247 yl~evl~~L~~~Y~~lg~~~~~~ 269 (389)
T COG2956 247 YLSEVLEMLYECYAQLGKPAEGL 269 (389)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 79999999999999947877899