HHsearch alignment for GI: 254780436 and conserved domain: COG3947
>COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms].
Probab=93.33 E-value=0.3 Score=23.62 Aligned_cols=51 Identities=16% Similarity=0.234 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999984998999999999986179998999999999999742888
Q gi|254780436|r 244 FWFNGGMVYEMQGSYANAVKYYKKALSVDSRYYRAKNGILRISQDLSSTVN 294 (298)
Q Consensus 244 ~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~~~~a~~~la~i~~~lg~~~~ 294 (298)
T Consensus 281 llgkva~~yle~g~~neAi~l~qr~ltldpL~e~~nk~lm~~la~~gD~is 331 (361)
T COG3947 281 LLGKVARAYLEAGKPNEAIQLHQRALTLDPLSEQDNKGLMASLATLGDEIS 331 (361)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 999999999975992789999987720270446789999999998065043