HHsearch alignment for GI: 254780436 and conserved domain: COG5010

>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].

Probab=98.79  E-value=2.7e-09  Score=67.26  Aligned_cols=102  Identities=19%  Similarity=0.146  Sum_probs=61.4

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
Q ss_conf             99999998199899999999999816899899999999999729852222111111111111111121100000001122
Q gi|254780436|r   40 EGCSSLFPSMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDV  119 (298)
Q Consensus        40 ~~~~~~~~~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~  119 (298)
T Consensus       105 ~~gk~~~~~g~~~~A~~~~rkA~~l~p~d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgms~~L~gd~  184 (257)
T COG5010         105 AQGKNQIRNGNFGEAVSVLRKAARLAPTDWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGMSLLLRGDL  184 (257)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCH
T ss_conf             99999998045688999999984369997466667789999736756778999999984258844666589999972779


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2211111122221111111222
Q gi|254780436|r  120 PMAIRDYGTALKINPDYDVAYI  141 (298)
Q Consensus       120 ~~a~~~~~~~~~~~~~~~~~~~  141 (298)
T Consensus       185 ~~A~~lll~a~l~~~ad~~v~~  206 (257)
T COG5010         185 EDAETLLLPAYLSPAADSRVRQ  206 (257)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHH
T ss_conf             8999999999867887638999