HHsearch alignment for GI: 254780436 and conserved domain: KOG1550

Probab=94.54  E-value=0.017  Score=30.37  Aligned_cols=225  Identities=19%  Similarity=0.151  Sum_probs=94.3

Q ss_pred             HHHHHHHHHCC------CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC---CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999819------9899999999999816899899999999999729---85222211111111111111112110
Q gi|254780436|r   39 IEGCSSLFPSM------GRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNG---DFEKALLDFQSALDLNPRYYKVYANR  109 (298)
Q Consensus        39 ~~~~~~~~~~~------~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~~  109 (298)
T Consensus       291 ~~~lg~~Y~~g~~~~~~d~~~A~~~~~~aA~~--g~~~a~~~lg~~~~~g~~~~d~~~A~~yy~~Aa~~--G~~~A~~~l  366 (552)
T KOG1550         291 QYGLGRLYLQGLGVEKIDYEKALKLYTKAAEL--GNPDAQYLLGVLYETGTKERDYRRAFEYYSLAAKA--GHILAIYRL  366 (552)
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHH
T ss_conf             47999999818987512499999999999855--99048999889876276321388999999999975--998999999


Q ss_pred             CHHHCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC
Q ss_conf             0000001----12222111111222211111112222222222211111111111211112222222----222222222
Q gi|254780436|r  110 ALIRYKM----GDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSD----GRAWYGRAL  181 (298)
Q Consensus       110 ~~~~~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  181 (298)
T Consensus       367 a~~y~~G~gv~r~~~~A~~~~k~aA~~g~--~~A~~~~~~~~~~g~-~~~~~~~~~~~~~a~~g~~~~q~~a~~l~~~~~  443 (552)
T KOG1550         367 ALCYELGLGVERNLELAFAYYKKAAEKGN--PSAAYLLGAFYEYGV-GRYDTALALYLYLAELGYEVAQSNAAYLLDQSE  443 (552)
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
T ss_conf             99997477868877899999999998278--867999999998535-652278999999999661056665999997501


Q ss_pred             CCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             11111----1111222121111111122212222222222211----111111222111223233388899999999999
Q gi|254780436|r  182 VYQMR----GEYEKSIEDFSQAISLYSSISPDYYNGRGISYLA----TKNYDSALEDFKFAINLDPKKASFWFNGGMVYE  253 (298)
Q Consensus       182 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~  253 (298)
T Consensus       444 ~~~~~~~~~~~~~~~~~~~~~a---~~~g~~~a~~~lgd~y~~g~g~~~d~~~a~~~y~~a~~~~---~~~~~nlg~~~e  517 (552)
T KOG1550         444 EDLFSRGVISTLERAFSLYSRA---AAQGNADAILKLGDYYYYGLGTGRDPEKAAAQYARASEQG---AQALFNLGYMHE  517 (552)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHH---HHCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH---HHHHHCCHHHHH
T ss_conf             3445666421078999989887---6425715665205555546887999648999999986652---586733023876


Q ss_pred             H---CCCHHHHHHHHHHHHHHCCCCH
Q ss_conf             8---4998999999999986179998
Q gi|254780436|r  254 M---QGSYANAVKYYKKALSVDSRYY  276 (298)
Q Consensus       254 ~---~g~~~~A~~~~~kAl~l~P~~~  276 (298)
T Consensus       518 ~g~g~~~~~~a~~~~~~~~~~~~~~~  543 (552)
T KOG1550         518 HGEGIKVLHLAKRYYDQASEEDSRAY  543 (552)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCHHH
T ss_conf             27585347899999998752160667