HHsearch alignment for GI: 254780436 and conserved domain: KOG1840

Probab=99.15  E-value=3e-11  Score=77.93  Aligned_cols=244  Identities=19%  Similarity=0.170  Sum_probs=146.1

Q ss_pred             HCCCHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHH
Q ss_conf             325979999899999997--------231999999999999-819989999999999981--------689989999999
Q gi|254780436|r   14 GFLRSSKRRGYYSLLSVL--------VVSVILLIEGCSSLF-PSMGRRVNIDSLTAVIRA--------HPSDPEGYNVRG   76 (298)
Q Consensus        14 ~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~Ai~~~~~al~~--------~P~~~~~~~~lg   76 (298)
T Consensus       211 ~~g~~e~A~~l~k~Al~~l~k~~G~~hl~va~~l~~~a~~y~~~~k~~eAv~ly~~AL~i~e~~~G~~h~~va~~l~nLa  290 (508)
T KOG1840         211 VQGRLEKAEPLCKQALRILEKTSGLKHLVVASMLNILALVYRSLGKYDEAVNLYEEALTIREEVFGEDHPAVAATLNNLA  290 (508)
T ss_pred             HHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             85207789999999999998703766689999999999999974428999999999999999853898789999998899


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999729852222111111111111--------11112110000000112222111111222211111112222222222
Q gi|254780436|r   77 VVYGMNGDFEKALLDFQSALDLNPR--------YYKVYANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYR  148 (298)
Q Consensus        77 ~~~~~~g~~~~A~~~~~~al~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (298)
T Consensus       291 ~ly~~~GKf~EA~~~~e~Al~I~~~~~~~~~~~v~~~l~~~~~~~~~~~~~Eea~~l~q~al~i~~~~~-----------  359 (508)
T KOG1840         291 VLYYKQGKFAEAEEYCERALEIYEKLLGASHPEVAAQLSELAAILQSMNEYEEAKKLLQKALKIYLDAP-----------  359 (508)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC-----------
T ss_conf             998604775778999999999999850368589999998999999885205689999999999998614-----------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCC
Q ss_conf             211111111111211112222222222222222111111111222121111111122-------2122222222222111
Q gi|254780436|r  149 DERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISLYSS-------ISPDYYNGRGISYLAT  221 (298)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  221 (298)
T Consensus       360 -----------------g~~~~~~a~~~~nl~~l~~~~gk~~ea~~~~k~ai~~~~~~~~~~~~~~~~~l~~la~~~~~~  422 (508)
T KOG1840         360 -----------------GEDNVNLAKIYANLAELYLKMGKYKEAEELYKKAIQILRELLGKKDYGVGKPLNQLAEAYEEL  422 (508)
T ss_pred             -----------------CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             -----------------641057898998999999994465679999999999988615676714547899999999983


Q ss_pred             CCCCCCCCCCCCCCC-------CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHH
Q ss_conf             111112221112232-------33388899999999999849989999999999861--------79998999999999
Q gi|254780436|r  222 KNYDSALEDFKFAIN-------LDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSV--------DSRYYRAKNGILRI  285 (298)
Q Consensus       222 ~~~~~a~~~~~~a~~-------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l--------~P~~~~a~~~la~i  285 (298)
T Consensus       423 k~~~~a~~l~~~~~~i~~~~g~~~~~~~~~~~nL~~~Y~~~g~~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (508)
T KOG1840         423 KKYEEAEQLFEEAKDIMKLCGPDHPDVTYTYLNLAALYRAQGNYEAAEELEEKVLNAREQRLGTASPTVEDEKLRLADL  501 (508)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf             4602289999999889998588997468999889999997356888999999998999970788885212467640677