HHsearch alignment for GI: 254780436 and conserved domain: KOG4555

Probab=97.98  E-value=4.9e-06  Score=49.61  Aligned_cols=97  Identities=21%  Similarity=0.307  Sum_probs=77.6

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCHHHCCC
Q ss_conf             999999819989999999999981689989999999999972985222211111111111111----1121100000001
Q gi|254780436|r   41 GCSSLFPSMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYY----KVYANRALIRYKM  116 (298)
Q Consensus        41 ~~~~~~~~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~~~~~~~~~  116 (298)
T Consensus        49 ~~valaE~g~Ld~AlE~F~qal~l~P~raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa~vQRg~lyRl~  128 (175)
T KOG4555          49 KAIALAEAGDLDGALELFGQALCLAPERASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQAFVQRGLLYRLL  128 (175)
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             98898850456789999999998543353866139999987288187899899999862862069999999999999993


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             122221111112222111111
Q gi|254780436|r  117 GDVPMAIRDYGTALKINPDYD  137 (298)
Q Consensus       117 ~~~~~a~~~~~~~~~~~~~~~  137 (298)
T Consensus       129 g~dd~AR~DFe~AA~LGS~FA  149 (175)
T KOG4555         129 GNDDAARADFEAAAQLGSKFA  149 (175)
T ss_pred             CCHHHHHHHHHHHHHHCCHHH
T ss_conf             761888886999998678789