HHsearch alignment for GI: 254780436 and conserved domain: PRK06330

>PRK06330 transcript cleavage factor/unknown domain fusion protein; Validated.
Probab=95.50  E-value=0.0089  Score=31.90  Aligned_cols=47  Identities=17%  Similarity=0.174  Sum_probs=17.2

Q ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             998999999999998168998999999999997298522221111111
Q gi|254780436|r   49 MGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSAL   96 (298)
Q Consensus        49 ~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al   96 (298)
T Consensus       131 ~~n~el~~iwerlv~~D~~~~e~~~~~a~~~e~~-d~~kai~y~k~A~  177 (906)
T PRK06330        131 KKNKELKVIWERLVKADRDNPEIVKKLATSYEEE-DKEKSITYLKKAI  177 (906)
T ss_pred             CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC-CHHHHHHHHHHHH
T ss_conf             5774389999999971344668999998888740-2688999999999