HHsearch alignment for GI: 254780436 and conserved domain: PRK10866
>PRK10866 outer membrane protein assembly complex subunit YfiO; Provisional.
Probab=97.20 E-value=8e-05 Score=43.02 Aligned_cols=197 Identities=13% Similarity=0.087 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998999999999997298522221111111111111111---21100000001122221111112222111111122222
Q gi|254780436|r 67 SDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKV---YANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGR 143 (298)
Q Consensus 67 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 143 (298)
T Consensus 30 ~~~~~~Y~~A~~~~~~~~y~~A~~~fe~l~~~yP~s~~A~qA~L~~ayayy~~~~y~~A~~~~~rFi~lyP~~~~v~Ya~ 109 (243)
T PRK10866 30 NPPNEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVM 109 (243)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99999999999999878999999999999986899767899999999998730778999999999998678999738999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222211111111111211112222222222222222111111111222121111111122212222222222211111
Q gi|254780436|r 144 GNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKN 223 (298)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
T Consensus 110 Yl~gl~~----~~~-----------~~~~~~~~~~~~~~~rD~~~~~~A~~~f~~li~~yP~S~Ya~d---A~------- 164 (243)
T PRK10866 110 YMRGLTN----MAL-----------DDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTD---AT------- 164 (243)
T ss_pred HHHHHHH----HHC-----------CHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH---HH-------
T ss_conf 9988987----740-----------1358888743256430769999999999999987899845899---99-------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 111222111223233388899999999999849989999999999861799---9899999999999974288874
Q gi|254780436|r 224 YDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSR---YYRAKNGILRISQDLSSTVNEV 296 (298)
Q Consensus 224 ~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~---~~~a~~~la~i~~~lg~~~~~~ 296 (298)
T Consensus 165 --------~r~~~lrn~LA~~El~Va~fY~kr~~y~AAi~R~~~vi~~Yp~t~~~~eAL~~l~eaY~~Lgl~~~A~ 232 (243)
T PRK10866 165 --------KRLVFLKDRLAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQAD 232 (243)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH
T ss_conf --------99999999999999999999999265699999999999768999633999999999999869978999