HHsearch alignment for GI: 254780436 and conserved domain: PRK11189
>PRK11189 lipoprotein NlpI; Provisional.
Probab=98.84 E-value=1.8e-09 Score=68.30 Aligned_cols=95 Identities=26% Similarity=0.411 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHCC----CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf 99999999998168----99899999999999729852222111111111111111121100000001122221111112
Q gi|254780436|r 53 VNIDSLTAVIRAHP----SDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVPMAIRDYGT 128 (298)
Q Consensus 53 ~Ai~~~~~al~~~P----~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 128 (298)
T Consensus 45 v~laRl~qlL~~~~Lt~e~rA~l~yeRGvlyDSlGLr~LAR~DF~qAL~l~P~~adayN~LGiy~tq~~~fD~AyEAFDs 124 (297)
T PRK11189 45 VILARLNQILASRDLTDEERAQLHYERGVLYDSLGLRALARNDFSQALALRPDMADAYNYLGIYLTQEGEFDAAYEAFDS 124 (297)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999974345898999999998314776412099998649989753998589999999999997119999999877
Q ss_pred CCCCCCCCCCCCCCCCCCC
Q ss_conf 2221111111222222222
Q gi|254780436|r 129 ALKINPDYDVAYIGRGNIY 147 (298)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~ 147 (298)
T Consensus 125 ~LEL~P~y~YA~lNRGIAl 143 (297)
T PRK11189 125 VLELDPTYDYAYLNRGIAL 143 (297)
T ss_pred HHHCCCCCHHHHHHHHHHH
T ss_conf 7726987348998302788