HHsearch alignment for GI: 254780436 and conserved domain: PRK11788
>PRK11788 hypothetical protein; Provisional.
Probab=99.50 E-value=1.4e-14 Score=95.91 Aligned_cols=221 Identities=19% Similarity=0.150 Sum_probs=158.4
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCHHHCC
Q ss_conf 99999981998999999999998168998999999999997298522221111111111111-----1112110000000
Q gi|254780436|r 41 GCSSLFPSMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRY-----YKVYANRALIRYK 115 (298)
Q Consensus 41 ~~~~~~~~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~ 115 (298)
T Consensus 41 ~Gln~Ll~~q~dkAid~f~~~~~~~~~t~e~hlaLG~LfRrrGE~dRAIriHq~Ll~r-p~L~~~~r~~a~~ELa~Dy~~ 119 (389)
T PRK11788 41 KGLNFLLNEQPDKAIDLFIEMLKVDPETVELHLALGNLFRRRGEVDRAIRIHQNLLSR-PDLTREQRLLALQELGQDYLK 119 (389)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHH
T ss_conf 8998872589459999999998648114999999999999656088999999999728-798999999999999999986
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11222211111122221111111222222222221111111111121111222222222222222211111111122212
Q gi|254780436|r 116 MGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIED 195 (298)
Q Consensus 116 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (298)
T Consensus 120 aGllDRAE~~f~~l~~~~~~~~~al~~Ll~iye--~~~dW~~Ai~~a~~L~~~~-------------------------- 171 (389)
T PRK11788 120 AGLLDRAEELFLQLVDEDDFAEGALRQLLTIYQ--QEKDWQKAIEVAERLEKLG-------------------------- 171 (389)
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCC--------------------------
T ss_conf 774999999999998285426999999999999--8645999999999998704--------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 11111111222122222222222111111112221112232333888999999999998499899999999998617999
Q gi|254780436|r 196 FSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSRY 275 (298)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~~ 275 (298)
T Consensus 172 ----~~~~~~~iAhy~CElA~~~~~~~~~~~A~~~L~kAL~~dp~cvRA~lllg~l~~~~g~~~~Ai~~l~~i~~q~p~~ 247 (389)
T PRK11788 172 ----GDSLRKEIAHFYCELAQQALARGDLDAARALLKKALAADPQCVRASILLGDLALAQGDYAAAIEALERVEEQDPEY 247 (389)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
T ss_conf ----7650699999999999999874899999999999987482434189999999998799999999999999739577
Q ss_pred H-HHHHHHHHHHHHHHHHHH
Q ss_conf 8-999999999999742888
Q gi|254780436|r 276 Y-RAKNGILRISQDLSSTVN 294 (298)
Q Consensus 276 ~-~a~~~la~i~~~lg~~~~ 294 (298)
T Consensus 248 l~~vl~~L~~~y~~l~~~~~ 267 (389)
T PRK11788 248 LPEVLPKLMECYQALGDEAE 267 (389)
T ss_pred HHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999999998288889