HHsearch alignment for GI: 254780436 and conserved domain: PRK11788

>PRK11788 hypothetical protein; Provisional.
Probab=99.50  E-value=1.4e-14  Score=95.91  Aligned_cols=221  Identities=19%  Similarity=0.150  Sum_probs=158.4

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCHHHCC
Q ss_conf             99999981998999999999998168998999999999997298522221111111111111-----1112110000000
Q gi|254780436|r   41 GCSSLFPSMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRY-----YKVYANRALIRYK  115 (298)
Q Consensus        41 ~~~~~~~~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~~  115 (298)
T Consensus        41 ~Gln~Ll~~q~dkAid~f~~~~~~~~~t~e~hlaLG~LfRrrGE~dRAIriHq~Ll~r-p~L~~~~r~~a~~ELa~Dy~~  119 (389)
T PRK11788         41 KGLNFLLNEQPDKAIDLFIEMLKVDPETVELHLALGNLFRRRGEVDRAIRIHQNLLSR-PDLTREQRLLALQELGQDYLK  119 (389)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHH
T ss_conf             8998872589459999999998648114999999999999656088999999999728-798999999999999999986


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             11222211111122221111111222222222221111111111121111222222222222222211111111122212
Q gi|254780436|r  116 MGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIED  195 (298)
Q Consensus       116 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (298)
T Consensus       120 aGllDRAE~~f~~l~~~~~~~~~al~~Ll~iye--~~~dW~~Ai~~a~~L~~~~--------------------------  171 (389)
T PRK11788        120 AGLLDRAEELFLQLVDEDDFAEGALRQLLTIYQ--QEKDWQKAIEVAERLEKLG--------------------------  171 (389)
T ss_pred             CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCC--------------------------
T ss_conf             774999999999998285426999999999999--8645999999999998704--------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             11111111222122222222222111111112221112232333888999999999998499899999999998617999
Q gi|254780436|r  196 FSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSRY  275 (298)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~~  275 (298)
T Consensus       172 ----~~~~~~~iAhy~CElA~~~~~~~~~~~A~~~L~kAL~~dp~cvRA~lllg~l~~~~g~~~~Ai~~l~~i~~q~p~~  247 (389)
T PRK11788        172 ----GDSLRKEIAHFYCELAQQALARGDLDAARALLKKALAADPQCVRASILLGDLALAQGDYAAAIEALERVEEQDPEY  247 (389)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
T ss_conf             ----7650699999999999999874899999999999987482434189999999998799999999999999739577


Q ss_pred             H-HHHHHHHHHHHHHHHHHH
Q ss_conf             8-999999999999742888
Q gi|254780436|r  276 Y-RAKNGILRISQDLSSTVN  294 (298)
Q Consensus       276 ~-~a~~~la~i~~~lg~~~~  294 (298)
T Consensus       248 l~~vl~~L~~~y~~l~~~~~  267 (389)
T PRK11788        248 LPEVLPKLMECYQALGDEAE  267 (389)
T ss_pred             HHHHHHHHHHHHHHCCCHHH
T ss_conf             99999999999998288889