>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795).

Probab=98.31 E-value=3.7e-07 Score=55.72 Aligned_cols=183 Identities=16% Similarity=0.103 Sum_probs=120.2 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 9989999999999972985222211111111111111---1121100000001122221111112222111111122222 Q gi|254780436|r 67 SDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYY---KVYANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGR 143 (298) Q Consensus 67 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 143 (298) T Consensus 31 ~~~~~lY~~a~~~~~~~~y~~A~~~fe~l~~~yp~s~~a~~A~l~~a~a~y~~~~y~~A~~~~~~Fi~~yP~~~~~~ya~ 110 (235) T TIGR03302 31 RPAEELYNEAKEALDSGDYTEAIKYFEALESRYPFSPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAY 110 (235) T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH T ss_conf 89999999999999878999999999999986899313799999999999976439999999999999887743499999 Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf ---22222211111111111211112222222222222222111111111222121111111122212222222222211 Q gi|254780436|r 144 ---GNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLA 220 (298) Q Consensus 144 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (298) T Consensus 111 y~~a~s~~~--------------~----~~~----------~~rDq~~~~~A~~~f~~~i~~yP~S~ya~---------- 152 (235) T TIGR03302 111 YLRGLSNYK--------------Q----IDD----------SDRDQTAAREAFEAFQELIRRYPNSEYAP---------- 152 (235) T ss_pred HHHHHHHHH--------------H----CCC----------CCCCHHHHHHHHHHHHHHHHHCCCCHHHH---------- T ss_conf 998799887--------------3----665----------44580899999999999998889965799---------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHH Q ss_conf 111111222111223233388899999999999849989999999999861799---989999999999997428887 Q gi|254780436|r 221 TKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSR---YYRAKNGILRISQDLSSTVNE 295 (298) Q Consensus 221 ~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~---~~~a~~~la~i~~~lg~~~~~ 295 (298) T Consensus 153 -----dA~~---~i~~l~~~LA~~e~~ia~~Y~k~~~y~aAi~r~~~vl~~Yp~t~~~~eAl~~l~eay~~lg~~~~A 222 (235) T TIGR03302 153 -----DAKK---RMDYLRNRLAGKELYVARFYLKRGAYVAAINRFETVVENYPDTPATEEALARLVEAYLALGLTDLA 222 (235) T ss_pred -----HHHH---HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH T ss_conf -----9999---999999999999999999999841709999999999986899851399999999999986998999

HHsearch alignment for GI: 254780436 and conserved domain: TIGR03302