HHsearch alignment for GI: 254780436 and conserved domain: smart00028
>smart00028 TPR Tetratricopeptide repeats. Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Probab=96.86 E-value=0.00028 Score=40.09 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8999999999997298522221111111111111
Q gi|254780436|r 69 PEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRY 102 (298)
Q Consensus 69 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 102 (298)
T Consensus 1 ~~~~~~lg~~y~~~~~~~~Ai~~~~~al~~~p~~ 34 (34)
T smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPNN 34 (34)
T ss_pred CHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
T ss_conf 9289998999998236999999999977359999