RPSBLAST alignment for GI: 254780436 and conserved domain: TIGR02521

>gnl|CDD|131573 TIGR02521, type_IV_pilW, type IV pilus biogenesis/stability protein PilW. Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. Length = 234
 Score = 67.0 bits (164), Expect = 5e-12
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)

Query: 104 KVYANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFD 163
           K+    AL   + GD+ +A  +   AL+ +PD  +AY+     Y  ++  +L+KA   F 
Sbjct: 32  KIRVQLALGYLEQGDLEVAKENLDKALEHDPDDYLAYLALALYY--QQLGELEKAEDSFR 89

Query: 164 RAIQLKTSDGRAW--YGRALVYQMRGEYEKSIEDFSQAIS--LYSSISPDYYNGRGISYL 219
           RA+ L  ++G     YG  L  Q  G+YE++++ F QAI   LY   +    N  G+  L
Sbjct: 90  RALTLNPNNGDVLNNYGTFLCQQ--GKYEQAMQQFEQAIEDPLYPQPARSLEN-AGLCAL 146

Query: 220 ATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKK 267
              ++D A +    A+ +DP++         +Y ++G Y +A  Y ++
Sbjct: 147 KAGDFDKAEKYLTRALQIDPQRPESLLELAELYYLRGQYKDARAYLER 194