RPSBLAST alignment for GI: 254780436 and conserved domain: TIGR02521
>gnl|CDD|131573 TIGR02521, type_IV_pilW, type IV pilus biogenesis/stability protein PilW. Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. Length = 234
Score = 67.0 bits (164), Expect = 5e-12
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 104 KVYANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFD 163
K+ AL + GD+ +A + AL+ +PD +AY+ Y ++ +L+KA F
Sbjct: 32 KIRVQLALGYLEQGDLEVAKENLDKALEHDPDDYLAYLALALYY--QQLGELEKAEDSFR 89
Query: 164 RAIQLKTSDGRAW--YGRALVYQMRGEYEKSIEDFSQAIS--LYSSISPDYYNGRGISYL 219
RA+ L ++G YG L Q G+YE++++ F QAI LY + N G+ L
Sbjct: 90 RALTLNPNNGDVLNNYGTFLCQQ--GKYEQAMQQFEQAIEDPLYPQPARSLEN-AGLCAL 146
Query: 220 ATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKK 267
++D A + A+ +DP++ +Y ++G Y +A Y ++
Sbjct: 147 KAGDFDKAEKYLTRALQIDPQRPESLLELAELYYLRGQYKDARAYLER 194