RPSBLAST alignment for GI: 254780436 and conserved domain: COG3063

>gnl|CDD|32877 COG3063, PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 250
 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 39/195 (20%)

Query: 75  RGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVPMAIRDYGTALKINP 134
             + Y   GD+ +A  + + AL+ +P YY  +  RA    K+G+  +A   Y  AL + P
Sbjct: 41  LALGYLQQGDYAQAKKNLEKALEHDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAP 100

Query: 135 DYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIE 194
           +        G++  +                           YG  L  Q  G  E++++
Sbjct: 101 N-------NGDVLNN---------------------------YGAFLCAQ--GRPEEAMQ 124

Query: 195 DFSQAIS--LYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVY 252
            F +A++   Y   S    N  G+  L    +D A E  K A+ LDP+          ++
Sbjct: 125 QFERALADPAYGEPSDTLEN-LGLCALKAGQFDQAEEYLKRALELDPQFPPALLELARLH 183

Query: 253 EMQGSYANAVKYYKK 267
              G YA A  Y ++
Sbjct: 184 YKAGDYAPARLYLER 198