RPSBLAST alignment for GI: 254780436 and conserved domain: COG3063
>gnl|CDD|32877 COG3063, PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 250
Score = 49.2 bits (117), Expect = 1e-06
Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 39/195 (20%)
Query: 75 RGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVPMAIRDYGTALKINP 134
+ Y GD+ +A + + AL+ +P YY + RA K+G+ +A Y AL + P
Sbjct: 41 LALGYLQQGDYAQAKKNLEKALEHDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAP 100
Query: 135 DYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIE 194
+ G++ + YG L Q G E++++
Sbjct: 101 N-------NGDVLNN---------------------------YGAFLCAQ--GRPEEAMQ 124
Query: 195 DFSQAIS--LYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVY 252
F +A++ Y S N G+ L +D A E K A+ LDP+ ++
Sbjct: 125 QFERALADPAYGEPSDTLEN-LGLCALKAGQFDQAEEYLKRALELDPQFPPALLELARLH 183
Query: 253 EMQGSYANAVKYYKK 267
G YA A Y ++
Sbjct: 184 YKAGDYAPARLYLER 198