HHsearch alignment for GI: 254780437 and conserved domain: COG0828
>COG0828 RpsU Ribosomal protein S21 [Translation, ribosomal structure and biogenesis].
Probab=99.67 E-value=1.7e-16 Score=113.12 Aligned_cols=64 Identities=48% Similarity=0.674 Sum_probs=59.6
Q ss_pred EEEEEEECCC-HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0688872795-899999999999643449998743512695589999999998889999999998
Q gi|254780437|r 19 AVYVLVRDNN-VEQALRVLKKKMQGEGVLRELKMRGHYEKPSQKRVRLKSEAIRRSRKLMRKIAQ 82 (95)
Q Consensus 19 ~i~V~V~~nn-vE~AlR~lKrkv~~eGi~~elR~R~~YEKPsekRrRkk~ea~kR~~K~~rK~~~ 82 (95)
T Consensus 1 M~~v~V~ene~~d~ALrrFKr~~~k~gil~e~k~r~~yEkPs~krkrK~a~a~kr~~k~~~k~~~ 65 (67)
T COG0828 1 MPQVKVRENEPLDKALRRFKRKVEKEGILREMKEREFYEKPSEKRKRKKAAARKRKFKRLRKEQQ 65 (67)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98027369973999999999999998699999999832370199999999999999999998751