HHsearch alignment of GI: 254780437 and MMDB domain: 3i1m_U_
>3i1m_U (U:) 30S ribosomal protein S21; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_U* 2avy_U 2aw7_U 2vho_U 2vhp_U 3df1_U* 3df3_U* 3e1a_Q 3e1c_Q 1vs5_U 3i1o_U 3i1q_U 3i1s_U 3i1z_U 3i21_U 2qal_U* 2i2u_U 2i2p_U* 2qan_U* 2qb9_U* ...
Probab=99.50 E-value=8.9e-17 Score=114.38 Aligned_cols=66 Identities=35% Similarity=0.559 Sum_probs=60.0
Q ss_pred EEEEEEECCC-HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 0688872795-89999999999964344999874351269558999999999888999999999850
Q gi|254780437|r 19 AVYVLVRDNN-VEQALRVLKKKMQGEGVLRELKMRGHYEKPSQKRVRLKSEAIRRSRKLMRKIAQRE 84 (95)
Q Consensus 19 ~i~V~V~~nn-vE~AlR~lKrkv~~eGi~~elR~R~~YEKPsekRrRkk~ea~kR~~K~~rK~~~~~ 84 (95)
+++|.|.+|+ +|.||+.||++|+++||++|+|.|+||||||++++++..+|.++..+..++.....
T Consensus 1 M~~V~v~enE~~e~ALrRFKr~~~k~Gil~E~R~R~~yEkPs~~rkrk~~~a~kr~~k~~r~~~~~~ 67 (71)
T 3i1m_U 1 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARR 67 (71)
T ss_dssp ---CEEECCSSCCSCCCTTTTSSSTHHHHTTSSSCCCSSSHHHHHHHHHHTSCC-------------
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9843618999899999999999998466999987760258389999999999999999999974201