HHsearch results for GI: 254780437 and protein with PDBid: 3i1m_U
>3i1m_U 30S ribosomal protein S21; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_U* 2avy_U 2aw7_U 2vho_U 2vhp_U 3df1_U* 3df3_U* 3e1a_Q 3e1c_Q 1vs5_U 3i1o_U 3i1q_U 3i1s_U 3i1z_U 3i21_U 3kc4_U 2qal_U* 2i2u_U 2i2p_U* 2qan_U* ...
Probab=99.57 E-value=7.8e-18 Score=119.42 Aligned_cols=64 Identities=34% Similarity=0.550 Sum_probs=58.5
Q ss_pred EEEEEEECCC-HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0688872795-899999999999643449998743512695589999999998889999999998
Q gi|254780437|r 19 AVYVLVRDNN-VEQALRVLKKKMQGEGVLRELKMRGHYEKPSQKRVRLKSEAIRRSRKLMRKIAQ 82 (95)
Q Consensus 19 ~i~V~V~~nn-vE~AlR~lKrkv~~eGi~~elR~R~~YEKPsekRrRkk~ea~kR~~K~~rK~~~ 82 (95)
++.|.|++|+ +|.|||+||++|+++||++|+|.|+||||||+++++++.+|.+|+.+...+...
T Consensus 1 M~~V~V~e~E~~e~aLRRFKr~vek~Gil~E~R~R~~yEKPs~~rkrk~~~A~kR~~k~~~~~~~ 65 (71)
T 3i1m_U 1 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENA 65 (71)
T ss_dssp ---CEEECCSSCCSCCCTTTTSSSTHHHHTTSSSCCCSSSHHHHHHHHHHTSCC-----------
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98436189997999999999999984549999877623683799999999999999999999851