HHsearch alignment for GI: 254780438 and conserved domain: pfam03740
>pfam03740 PdxJ Pyridoxal phosphate biosynthesis protein PdxJ. Members of this family belong to the PdxJ family that catalyses the condensation of 1-deoxy-d-xylulose-5-phosphate (DXP) and 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one to form pyridoxine 5'-phosphate (PNP). This reaction is involved in de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate.
Probab=100.00 E-value=0 Score=715.67 Aligned_cols=238 Identities=39% Similarity=0.643 Sum_probs=228.2
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH
Q ss_conf 45332214432232207886899899999999749989998247883348889999988740001367415888348568
Q gi|254780438|r 3 TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET 82 (261)
Q Consensus 3 t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e 82 (261)
T Consensus 1 mrL~VNidhiAtLRnaRg~~~Pd~~~aa~~~~~~GadgITvHlReDrRHI~d~Dv~~l~~~~-----~~~lNlE~~~~~e 75 (239)
T pfam03740 1 MRLGVNIDHIATLRNARGTPYPDPVEAALIAERAGADGITVHLREDRRHIQDRDVEVLKELI-----RTRFNIEMAPTEE 75 (239)
T ss_pred CEEEEEECCEEEHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHC-----CCCEEECCCCHHH
T ss_conf 93226301021012058999989999999999839986895258876545237899999972-----8746775687499
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
Q ss_conf 99999850721289710165553335782213337889999986202696389972544441479999740661465112
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT 162 (261)
T Consensus 76 mi~ia~~~kP~qvtLVPE~r~elTTegGld~~~~~~~L~~~i~~lk~~girvSlFIDpd~~~--i~~a~~~Gad~VElhT 153 (239)
T pfam03740 76 MLELALKTKPHQVTLVPEKREEITTEGGLDVVAQLEKLKPAIRRLKNAGIRVSLFIDPDPEQ--IEAAKIVGADRIELHT 153 (239)
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHH--HHHHHHCCCCEEEEEC
T ss_conf 99999984998589888999873568880633406899999999860785389970799899--9999980929998504
Q ss_pred CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 1110244435643-366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r 163 GPYGACYNNPQQE-RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC 241 (261)
Q Consensus 163 G~Ya~a~~~~~~~-~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~ 241 (261)
T Consensus 154 G~YA~a~~~~~~~~~~~l~~i~~aa~~A~~lGL~VnAGHgLn~~Nl~~l-~~i~~i~EvnIGHaiI~~al~~Gl~~aV~~ 232 (239)
T pfam03740 154 GPYADAHNDAEQAREELLERLAAGAALAFDLGLVVNAGHGLTYHNVKPV-AKIPPIAELNIGHSLVAEALFVGLAKAVLE 232 (239)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH-HCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 7788775131555799999999999999874985746789887669998-528997488556999999999749999999
Q ss_pred HHHHHHH
Q ss_conf 9999974
Q gi|254780438|r 242 FRRACGQ 248 (261)
Q Consensus 242 ~~~ii~~ 248 (261)
T Consensus 233 ~~~ii~r 239 (239)
T pfam03740 233 MKALMKR 239 (239)
T ss_pred HHHHHCC
T ss_conf 9998668