HHsearch alignment of GI: 254780438 and MMDB domain: 1gte_A_523-742_762-821
>1gte_A (A:523-742,A:762-821) Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa}
Probab=95.21 E-value=0.31 Score=29.55 Aligned_cols=153 Identities=15% Similarity=0.081 Sum_probs=70.1
Q ss_pred CEEEEEECC--CHHHHH---HHHHHCCCEEEEEECCCCCCCCCCCCC-HHHHHHHHHHHHHHHCC-CCCEEEEEECCCCC
Q ss_conf 415888348--568999---998507212897101655533357822-13337889999986202-69638997254444
Q gi|254780438|r 71 AELNIEGYP--NETFLN---LCERYKPEQITLVPDDPHQLTSDHGWD-FLQNQALLTKTVARLHN-LGSRISLFADGNGN 143 (261)
Q Consensus 71 ~elNiEg~p--~~e~i~---ia~~ikP~qvtLVPe~r~elTTegGld-v~~~~~~L~~~i~~l~~-~girvSLFIDpd~~ 143 (261)
.++..+... -+++.. ++.+..-+.+-+-=--+..+.+.++.. ......++.+.+...++ .++.+++-+-++++
T Consensus 114 ~~l~~~~~~~~~~~~~~aa~~~~~~g~d~Iein~~~~~~~~~~~~g~~~~~~~~~~~e~i~~v~~~~~~pv~vk~r~~~~ 193 (280)
T 1gte_A 114 IVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVT 193 (280)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSS
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
T ss_conf 34577568899999999999745358888999767899987433343110168999999999861789987999799827
Q ss_pred C--HHHHHHHHCCCCEEEECCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCEEEECCCCC-HHHHHHHHHHCCCC
Q ss_conf 1--47999974066146511211102444356---433666889998766541562352078989-87799999736996
Q gi|254780438|r 144 E--HSLQAAKLTGADCIELYTGPYGACYNNPQ---QERIFLNKLAITAQLAQKMDLQINAGHDLT-IQNIPNLINAIPYI 217 (261)
Q Consensus 144 q--~~i~~a~~~Gad~VElhTG~Ya~a~~~~~---~~~~el~~i~~aa~~A~~lgL~VnAGHgLn-~~Nl~~~i~~Ip~I 217 (261)
+ ...+.+.+.|+|.|.+|-+.+..-..... ....-+.-+....+... ++.|-|.=|+. -+.+...++ + +-
T Consensus 194 d~~e~a~~l~e~Gvd~I~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ii~~ggi~~~~~~~~~~~-~-GA 269 (280)
T 1gte_A 194 DIVSIARAAKEGGADGVTATNTVSGLMYGGVSGTAIRPIALRAVTTIARALP--GFPILATGGIDSAESGLQFLH-S-GA 269 (280)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCEEEESGGGHHHHHHHHHHHHHHST--TCCEEEESSCCSHHHHHHHHH-T-TC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHCC--CCCEEEECCCCCHHHHHHHHH-C-CC
T ss_conf 8999999999859969999567776556700278889999999999998769--987999899899999999998-6-99
Q ss_pred EEEEEHHHHH
Q ss_conf 3884259999
Q gi|254780438|r 218 SEISVGHAFA 227 (261)
Q Consensus 218 ~EvsIGHaiI 227 (261)
+=|++|-+++
T Consensus 270 ~~v~~~~~~~ 279 (280)
T 1gte_A 270 SVLQVCSAVQ 279 (280)
T ss_dssp SEEEESHHHH
T ss_pred CHHHHHHHHH
T ss_conf 7998769999