HHsearch alignment of GI: 254780438 and MMDB domain: 1o94_A_1-343
>1o94_A (A:1-343) Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus}
Probab=94.83 E-value=0.39 Score=28.85 Aligned_cols=130 Identities=9% Similarity=0.032 Sum_probs=80.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC---CCEEEEEECCC--------CCCHHH---HHHHHCCCCEEEECCCCCH
Q ss_conf 655533357822133378899999862026---96389972544--------441479---9997406614651121110
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNL---GSRISLFADGN--------GNEHSL---QAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~---girvSLFIDpd--------~~q~~i---~~a~~~Gad~VElhTG~Ya 166 (261)
..+..|.+-|=++.....++.++++.+++. .+.|.+=+.++ ..+..+ ....+.|+|.+.+|.|.|.
T Consensus 183 ~~n~r~d~yGgsl~nr~r~~~eii~air~~~~~~~~V~iR~~~~d~~~~g~~~~e~~~~~~~~l~~~g~d~i~v~~~~~~ 262 (343)
T 1o94_A 183 YYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIA 262 (343)
T ss_dssp TTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCST
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCC
T ss_conf 37899643578856651789999998885508986589997430055899775667789999999844444241346522
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHCCCEE-EECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 2444356--43366688999876654156235-20789898779999973699638842599999999
Q gi|254780438|r 167 ACYNNPQ--QERIFLNKLAITAQLAQKMDLQI-NAGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 167 ~a~~~~~--~~~~el~~i~~aa~~A~~lgL~V-nAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
....... ...........+.........-| -.|.-.+.+....++++ ...+=|.+|-.++++-=
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~s~~~~~~~l~~-g~~D~V~~gR~~ladP~ 329 (343)
T 1o94_A 263 EWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTK-GYADIIGCARPSIADPF 329 (343)
T ss_dssp TGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHT-TSCSBEEESHHHHHCTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCCEEECCHHHHCCCC
T ss_conf 32335566545664444047999876417852145896899999999987-99874630569871930