HHsearch alignment of GI: 254780438 and MMDB domain: 1xi3_A_
>1xi3_A (A:) Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus}
Probab=94.53 E-value=0.46 Score=28.38 Aligned_cols=194 Identities=14% Similarity=0.089 Sum_probs=125.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 78868998999999997499899982478833488899999887400013674158883485689999985072128971
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLV 98 (261)
.+.++++..+.+..++++|++.|-+........-.-..+...+..+. ..-..-....+...+.+...+.+.+-
T Consensus 21 ~~~~~~~~~~~~~~~~~~G~~~i~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~gad~i~~~ 93 (215)
T 1xi3_A 21 TDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTR-------EYDALFFVDDRVDVALAVDADGVQLG 93 (215)
T ss_dssp CCTTTSCHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHH-------HTTCEEEEESCHHHHHHHTCSEEEEC
T ss_pred ECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHH-------HCCCEEEECCHHHHHHHCCCCEEEEC
T ss_conf 08852778999999998799899982799999999999999998776-------21937995327999875057878753
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
+.... ....+-...++.+..-+. +++ .+..+.+.|+|.|-+++..+........
T Consensus 94 ~~~~~------------------~~~~~~~~~~~~~~~~~~-t~~--e~~~a~~~g~d~i~~~~~~~t~~~~~~~----- 147 (215)
T 1xi3_A 94 PEDMP------------------IEVAKEIAPNLIIGASVY-SLE--EALEAEKKGADYLGAGSVFPTKTKEDAR----- 147 (215)
T ss_dssp TTSCC------------------HHHHHHHCTTSEEEEEES-SHH--HHHHHHHHTCSEEEEECSSCC----CCC-----
T ss_pred HHHHH------------------HHHHHHCCCCCCCCCCCC-CHH--HHHHHHHCCCCEEEEECCCCCCCCCCCC-----
T ss_conf 01333------------------555431265422134545-099--9998874597789860132256655553-----
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
..............++.|-||=|.+-+|+..+++ -+.+=|-||-+|... -...++++++++++++.+
T Consensus 148 ~~~~~~~~~~~~~~~ipi~~~GGi~~~~i~~~~~--~GadgV~vGsai~~~---~dp~~~~~~~~~~~~~~r 214 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLK--TGVDGIAVISAVMGA---EDVRKATEELRKIVEEVL 214 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHT--TTCSEEEESHHHHTS---SSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH--HCCCEEEEHHHHHCC---CCHHHHHHHHHHHHHHHH
T ss_conf 2226888888872578816766899999999998--199899973997779---999999999999999963