HHsearch results for GI: 254780438 and protein with PDBid: 1twd_A
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=91.11 E-value=0.97 Score=25.08 Aligned_cols=195 Identities=15% Similarity=0.142 Sum_probs=115.6
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHHCCCCCCCEEEEEECCCH--------H---HH---HHHHHH
Q ss_conf 9999999974998999824788334888--999998874000136741588834856--------8---99---999850
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPDQRHIRY--TDLPEIRRLIDEQFPKAELNIEGYPNE--------T---FL---NLCERY 90 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~DrRHI~~--~Dv~~l~~~~~~~~~~~elNiEg~p~~--------e---~i---~ia~~i 90 (261)
++-|..|.++|||-|-+--.-..==.+| ..+..+++.+ ++|+.+=.-|.. | |. ..+.+.
T Consensus 11 ~~~a~~A~~~GAdRIELCs~L~~GGlTPS~gli~~~~~~~-----~ipv~vMIRPR~GdF~Ys~~E~~~M~~dI~~~k~~ 85 (256)
T 1twd_A 11 MECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRV-----TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVREL 85 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHC-----CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-----CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9999999982999899846766699799999999999973-----99749998458998888999999999999999985
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE--EC--CCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 72128971016555333578221333788999998620269638997--25--444414799997406614651121110
Q gi|254780438|r 91 KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF--AD--GNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 91 kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF--ID--pd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
.-+-+-+ +-||.||.+|... ++..++..+. ..+-+- +| +||.+ +++...++|+++|== .|--.
T Consensus 86 G~dGvVf-----G~L~~dg~iD~~~----~~~Li~~a~~--l~vTFHRAfD~~~d~~~-al~~Li~lG~~rILT-SG~~~ 152 (256)
T 1twd_A 86 GFPGLVT-----GVLDVDGNVDMPR----MEKIMAAAGP--LAVTFHRAFDMCANPLY-TLNNLAELGIARVLT-SGQKS 152 (256)
T ss_dssp TCSEEEE-----CCBCTTSSBCHHH----HHHHHHHHTT--SEEEECGGGGGCSCHHH-HHHHHHHHTCCEEEE-CTTSS
T ss_pred CCCEEEE-----EEECCCCCCCHHH----HHHHHHHHCC--CCEEEECCHHHHCCHHH-HHHHHHHCCCCEEEC-CCCCC
T ss_conf 9996788-----6688999849999----9999998576--86477442565289999-999999759897865-78967
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH--------HHHHHHHHH---
Q ss_conf 244435643366688999876654156235207898987799999736996388425999--------999999409---
Q gi|254780438|r 167 ACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF--------AATALECGV--- 235 (261)
Q Consensus 167 ~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai--------IseAl~~GL--- 235 (261)
.+... ++.+++..+++ -|..+-+|=|+|.+|+..++. . .+.|+.-.-.- -...+.+|.
T Consensus 153 ~a~~G-------~~~L~~L~~~a--~~~iIm~GgGI~~~Ni~~l~~-t-G~~e~H~Sa~~~~~s~~~~~~~~v~mg~~~~ 221 (256)
T 1twd_A 153 DALQG-------LSKIMELIAHR--DAPIIMAGAGVRAENLHHFLD-A-GVLEVHSSAGAWQASPMRYRNQGLSMSSDEH 221 (256)
T ss_dssp STTTT-------HHHHHHHHTSS--SCCEEEEESSCCTTTHHHHHH-H-TCSEEEECCEEEECCCCCCCC----------
T ss_pred CHHHH-------HHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHH-C-CCCEEEECCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 77776-------99999999856--993899727779999999997-7-9887987878656785523678764578878
Q ss_pred ----------HHHHHHHHHHHHHHH
Q ss_conf ----------999999999997410
Q gi|254780438|r 236 ----------KEAVFCFRRACGQHL 250 (261)
Q Consensus 236 ----------~~aI~~~~~ii~~~~ 250 (261)
++.|+++++++++..
T Consensus 222 ~~e~~~~~td~~~V~~~~~~l~~~~ 246 (256)
T 1twd_A 222 ADEYSRYIVDGAAVAEMKGIIERHQ 246 (256)
T ss_dssp ---CCEEEECHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8766426129999999999999874