HHSEARCH alignment of GI: 254780438 and SCOP domain: d1h1ya_

Alignment
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=94.67  E-value=0.087  Score=30.67  Aligned_cols=203  Identities=10%  Similarity=0.065  Sum_probs=136.4

Q ss_pred             CCCCHHHHHHHHHHCCCCEEEEECCCC----CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEE
Q ss_conf             689989999999974998999824788----3348889999988740001367415888348568999998507212897
Q gi|254780438|r   22 PWPNLVHIGKIALQSGASGLTVHPRPD----QRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITL   97 (261)
Q Consensus        22 ~~P~~~~~a~~~~~~GadgITvH~R~D----rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtL   97 (261)
                      ++=++.+-.+.+.++|+|.|-+-.=-.    .=-.-.+.+..+++....   ..+..+-...-++++.-..+..++.+|+
T Consensus        12 d~~~l~~ei~~l~~~~~d~iHiDimDg~Fvpn~t~~~~~i~~i~~~~~~---~~dvHLMv~~p~~~i~~~~~~g~~~I~~   88 (220)
T d1h1ya_          12 DFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKA---YLDCHLMVTNPSDYVEPLAKAGASGFTF   88 (220)
T ss_dssp             CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCS---EEEEEEESSCGGGGHHHHHHHTCSEEEE
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCH---HHHHHHHHCCHHHHHHHHHHCCCCEEEE
T ss_conf             8999999999999759998999620694466545583666566542450---1343887510545557765302341564


Q ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH-HHCC-CCEEEECCCCCHHHHHHHHHH
Q ss_conf             10165553335782213337889999986202696389972544441479999-7406-614651121110244435643
Q gi|254780438|r   98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA-KLTG-ADCIELYTGPYGACYNNPQQE  175 (261)
Q Consensus        98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a-~~~G-ad~VElhTG~Ya~a~~~~~~~  175 (261)
                      -.|.-.              +.+..++..+++.|+++.+=+.|+..-..++.. ..++ +|.|=+-|..-.-  ...+..
T Consensus        89 H~E~~~--------------~~~~~~i~~i~~~g~~~Glal~p~t~~~~~~~~l~~~~~~d~vlim~v~PG~--~GQ~f~  152 (220)
T d1h1ya_          89 HIEVSR--------------DNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGF--GGQKFM  152 (220)
T ss_dssp             EGGGCT--------------TTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTC--SSCCCC
T ss_pred             CCCCCC--------------HHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCC--CCCCCC
T ss_conf             001010--------------1288999999974977232421342156787777423566568887147998--644430


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             366688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r  176 RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL  250 (261)
Q Consensus       176 ~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~  250 (261)
                      ..-++|+++.-++  ..++.+-+-=|.|.+|++.+. + -+.+-+-.|=+|...   --..++++++++++++++
T Consensus       153 ~~~l~kI~~l~~~--~~~~~I~VDGGIn~~~i~~l~-~-aGad~~V~GS~if~~---~d~~~~i~~lr~~~~~a~  220 (220)
T d1h1ya_         153 PEMMEKVRALRKK--YPSLDIEVDGGLGPSTIDVAA-S-AGANCIVAGSSIFGA---AEPGEVISALRKSVEGSQ  220 (220)
T ss_dssp             GGGHHHHHHHHHH--CTTSEEEEESSCSTTTHHHHH-H-HTCCEEEESHHHHTS---SCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHC--CCCCEEEEEECCCHHHHHHHH-H-CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHCC
T ss_conf             0466799999862--897629999257999999999-8-799999978799789---999999999999998668


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Rice (Oryza sativa) [TaxId: 4530]