HHsearch alignment for GI: 254780439 and conserved domain: COG0045

>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=98.14  E-value=0.00028  Score=51.63  Aligned_cols=170  Identities=19%  Similarity=0.235  Sum_probs=115.5

Q ss_pred             HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEECCCCCCCCC----CEEECCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             99988870986685421121566555655369-716751344445654----1255489999999997521013221111
Q gi|254780439|r  741 FQKLLMELDLNQPRNGISHSVEHARLIACEIG-FPLLIRPSYVLGGRA----MQIVYSENMLQDYLLDTLPGLVSEEIKR  815 (1162)
Q Consensus       741 F~~ll~~l~i~~p~~~~a~s~eea~~~a~~iG-yPVLVRPSyVLGG~~----M~Iv~~~~eL~~yl~~a~~~~~~~~~~~  815 (1162)
T Consensus         8 aKelf~~~GiPvp~g~v~~s~eea~~~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~~~--   85 (387)
T COG0045           8 AKELFAKYGIPVPPGYVATSPEEAEEAAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQTDI--   85 (387)
T ss_pred             HHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCC--
T ss_conf             998999729989995454089999999998189967999225305766667668838989999999998486654576--


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECC-CCEEEEEEEEEECCC--EEEEEEEC---CCCHHCCCCCCE---EEEECCCCCC
Q ss_conf             22333333334557777456702201-201001010230798--49998520---110215245762---7981686689
Q gi|254780439|r  816 QYPNDKTGQINTLLGTHPLLFDSYLS-DAMEIDVDALCQNDQ--VIVVGIIE---HIEEAGIHSGDS---ACSLPSRSLS  886 (1162)
Q Consensus       816 ~~~~~~~~~~~~vs~~~pVlIdkfl~-~a~EiEVDai~Dg~~--v~I~gimE---HiE~aGVHSGDS---~~v~PpqsLs  886 (1162)
T Consensus        86 --------~---G~~v~~vlvee~~~~~~~E~Ylsiv~DR~~~~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~  154 (387)
T COG0045          86 --------K---GEPVNKVLVEEAVDIIKKEYYLSIVLDRSSRRPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLR  154 (387)
T ss_pred             --------C---CCEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCC
T ss_conf             --------8---84542899974677764337999999737783799996677951899500283452689747766878


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEEE---------ECCCEEEEEEECCCC
Q ss_conf             99999999999999874133576247885---------128859998524444
Q gi|254780439|r  887 QQLKDELISQTKALAGALNVIGLINVQYA---------IKDGKIYILEVNPRA  930 (1162)
Q Consensus       887 ~~~~~~i~~~t~~ia~~L~v~G~~NIQfa---------~kd~~iYVIEvNpRa  930 (1162)
T Consensus       155 ~~~-------aR~la~~lgl~~~~~~~~~~ii~~ly~~f~~~Da~lvEINPLv  200 (387)
T COG0045         155 PYQ-------ARELAFKLGLEGELVKQVADIIKKLYKLFVEKDATLVEINPLV  200 (387)
T ss_pred             HHH-------HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_conf             779-------9999997499878999999999999999997587678752508