HHsearch alignment for GI: 254780439 and conserved domain: COG0045
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=98.14 E-value=0.00028 Score=51.63 Aligned_cols=170 Identities=19% Similarity=0.235 Sum_probs=115.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEECCCCCCCCC----CEEECCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99988870986685421121566555655369-716751344445654----1255489999999997521013221111
Q gi|254780439|r 741 FQKLLMELDLNQPRNGISHSVEHARLIACEIG-FPLLIRPSYVLGGRA----MQIVYSENMLQDYLLDTLPGLVSEEIKR 815 (1162)
Q Consensus 741 F~~ll~~l~i~~p~~~~a~s~eea~~~a~~iG-yPVLVRPSyVLGG~~----M~Iv~~~~eL~~yl~~a~~~~~~~~~~~ 815 (1162)
T Consensus 8 aKelf~~~GiPvp~g~v~~s~eea~~~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~~~-- 85 (387)
T COG0045 8 AKELFAKYGIPVPPGYVATSPEEAEEAAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQTDI-- 85 (387)
T ss_pred HHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCC--
T ss_conf 998999729989995454089999999998189967999225305766667668838989999999998486654576--
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECC-CCEEEEEEEEEECCC--EEEEEEEC---CCCHHCCCCCCE---EEEECCCCCC
Q ss_conf 22333333334557777456702201-201001010230798--49998520---110215245762---7981686689
Q gi|254780439|r 816 QYPNDKTGQINTLLGTHPLLFDSYLS-DAMEIDVDALCQNDQ--VIVVGIIE---HIEEAGIHSGDS---ACSLPSRSLS 886 (1162)
Q Consensus 816 ~~~~~~~~~~~~vs~~~pVlIdkfl~-~a~EiEVDai~Dg~~--v~I~gimE---HiE~aGVHSGDS---~~v~PpqsLs 886 (1162)
T Consensus 86 --------~---G~~v~~vlvee~~~~~~~E~Ylsiv~DR~~~~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~ 154 (387)
T COG0045 86 --------K---GEPVNKVLVEEAVDIIKKEYYLSIVLDRSSRRPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLR 154 (387)
T ss_pred --------C---CCEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCC
T ss_conf --------8---84542899974677764337999999737783799996677951899500283452689747766878
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEE---------ECCCEEEEEEECCCC
Q ss_conf 99999999999999874133576247885---------128859998524444
Q gi|254780439|r 887 QQLKDELISQTKALAGALNVIGLINVQYA---------IKDGKIYILEVNPRA 930 (1162)
Q Consensus 887 ~~~~~~i~~~t~~ia~~L~v~G~~NIQfa---------~kd~~iYVIEvNpRa 930 (1162)
T Consensus 155 ~~~-------aR~la~~lgl~~~~~~~~~~ii~~ly~~f~~~Da~lvEINPLv 200 (387)
T COG0045 155 PYQ-------ARELAFKLGLEGELVKQVADIIKKLYKLFVEKDATLVEINPLV 200 (387)
T ss_pred HHH-------HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_conf 779-------9999997499878999999999999999997587678752508