HHsearch alignment for GI: 254780439 and conserved domain: COG0189
>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].
Probab=99.26 E-value=9.6e-09 Score=87.05 Aligned_cols=277 Identities=20% Similarity=0.271 Sum_probs=177.8
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC----------CEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEC
Q ss_conf 6531899999999965980699606865211232458----------637984167889999998748567822799844
Q gi|254780439|r 636 EFDYCCCHASFSLKEAGFETIMINCNPETVSTDYDIA----------DRLYFESLTEEDILEILRVEQQKGELVGIIVQF 705 (1162)
Q Consensus 636 EFDy~~v~a~~aLr~~G~~tImIN~NPETVSTDyd~s----------DrLYFEplt~E~V~~I~~~E~p~g~~~~vi~q~ 705 (1162)
T Consensus 14 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~D~i~~R~ 86 (318)
T COG0189 14 IYKDTTFALMEAAQKRGHELAILDDGDLSLRKGEIKALARLVEVGEVIGLHYELIEEEDLSLLD---E----LDVIIMRK 86 (318)
T ss_pred CCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC---C----CCEEEECC
T ss_conf 6554399998877860734899716531145133688886653221001012433310022203---6----72899737
Q ss_pred CCHH--HHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH-CCCCEEEECCCC
Q ss_conf 5124--6689888887598386127520331028678999888709866854211215665556553-697167513444
Q gi|254780439|r 706 GGQT--PLKLSKILEKNQIPILGTQPDSIDLAEDRDRFQKLLMELDLNQPRNGISHSVEHARLIACE-IGFPLLIRPSYV 782 (1162)
Q Consensus 706 gGqt--~~~la~~L~~~gv~ilGts~~~Id~aEDR~~F~~ll~~l~i~~p~~~~a~s~eea~~~a~~-iGyPVLVRPSyV 782 (1162)
T Consensus 87 ~~~~~~~~~~~~~~E~~G~~viN~p-~~i~~~~nK~~~~~~l~~~~ipvP~T~i~~~~~~~~~~~~~~~g~pvVlKp~~G 165 (318)
T COG0189 87 DPPFDFATRFLRLAERKGVPVINDP-QSIRRCRNKLYTTQLLAKAGIPVPPTLITRDPDEAAEFVAEHLGFPVVLKPLDG 165 (318)
T ss_pred CCHHHHHHHHHHHHHHCCCEEECCH-HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 8604568999999987498687887-998763557999999996599999868965847889999974689889964788
Q ss_pred CCCCCCEEECCHH-HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCEEEEE
Q ss_conf 4565412554899-999999975210132211112233333333455777745670220120100101023079849998
Q gi|254780439|r 783 LGGRAMQIVYSEN-MLQDYLLDTLPGLVSEEIKRQYPNDKTGQINTLLGTHPLLFDSYLSDAMEIDVDALCQNDQVIVVG 861 (1162)
Q Consensus 783 LGG~~M~Iv~~~~-eL~~yl~~a~~~~~~~~~~~~~~~~~~~~~~~vs~~~pVlIdkfl~~a~EiEVDai~Dg~~v~I~g 861 (1162)
T Consensus 166 s~G~gV~~v~~~d~~l~~~~e~~~~----------------------~~~~~~ivQeyi~~~~~~~rrivv~~-~~~~~~ 222 (318)
T COG0189 166 SGGRGVFLVEDADPELLSLLETLTQ----------------------EGRKLIIVQEYIPKAKRDDRRVLVGG-GEVVAI 222 (318)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHC----------------------CCCCEEEEECCCCCCCCCEEEEEEEC-CEEEEE
T ss_conf 8866559943776569999998634----------------------55642986203476778739999989-999898
Q ss_pred -EECCCCHHC-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCC-CH
Q ss_conf -520110215-----24576279816866899999999999999987413357624788512885999852444456-30
Q gi|254780439|r 862 -IIEHIEEAG-----IHSGDSACSLPSRSLSQQLKDELISQTKALAGALNVIGLINVQYAIKDGKIYILEVNPRASR-TV 934 (1162)
Q Consensus 862 -imEHiE~aG-----VHSGDS~~v~PpqsLs~~~~~~i~~~t~~ia~~L~v~G~~NIQfa~kd~~iYVIEvNpRaSR-tv 934 (1162)
T Consensus 223 y~~~R~~~~~~~R~N~a~G---g~~e~~~l~~e~~----elA~kaa~~l-Gl~~~GVDiie~~~g~~V~EVN~--sP~~~ 292 (318)
T COG0189 223 YALARIPASGDFRSNLARG---GRAEPCELTEEEE----ELAVKAAPAL-GLGLVGVDIIEDKDGLYVTEVNV--SPTGK 292 (318)
T ss_pred EEEECCCCCCCCEEECCCC---CEECCCCCCHHHH----HHHHHHHHHH-CCCEEEEEEEEECCCEEEEEEEC--CCCCC
T ss_conf 7120047777520101157---5204536999999----9999999974-89479999997089629999868--96523
Q ss_pred HHHHHHHCCCHHHHHHHHH
Q ss_conf 4567773988999999998
Q gi|254780439|r 935 PFIAKAIGFPVAKVAARII 953 (1162)
Q Consensus 935 PfvSKatG~pl~~iAt~v~ 953 (1162)
T Consensus 293 ~~i~~~~g~~~~~~~~~~i 311 (318)
T COG0189 293 GEIERVTGVNIAGLIIDAI 311 (318)
T ss_pred CCHHHCCCCCHHHHHHHHH
T ss_conf 5214306976799999999