HHsearch alignment for GI: 254780439 and conserved domain: COG0541

>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion].
Probab=90.48  E-value=1.2  Score=22.98  Aligned_cols=45  Identities=20%  Similarity=0.233  Sum_probs=22.0

Q ss_pred             CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             899999999987199699941326786645111699999999998998579
Q gi|254780439|r  203 HAMAVAVQALDEIGLPLIIRPSFTLGGTGGGIAYNRSEFLEIVENGLHASP  253 (1162)
Q Consensus       203 ~s~~ea~~~a~~iGyPvivRps~~lGG~G~~iv~n~eeL~~~~~~al~~s~  253 (1162)
T Consensus       169 ~Iak~al~~ak~~~~DvvIvD------TAGRl~ide~Lm~El~~Ik~~~~P  213 (451)
T COG0541         169 EIAKAALEKAKEEGYDVVIVD------TAGRLHIDEELMDELKEIKEVINP  213 (451)
T ss_pred             HHHHHHHHHHHHCCCCEEEEE------CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             999999999997499889996------887330309999999999855398