HHsearch alignment for GI: 254780439 and conserved domain: PRK01966
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed.
Probab=99.82 E-value=4.8e-17 Score=152.73 Aligned_cols=305 Identities=18% Similarity=0.213 Sum_probs=218.7
Q ss_pred CCEEEEECCCCEEECCCCCCCHH---HHHHHHHHHHCCCCEEEEECCCC----CCCCCCCCCCEEEEEECCHHHH-----
Q ss_conf 74189972763020147665318---99999999965980699606865----2112324586379841678899-----
Q gi|254780439|r 618 RKKIVILGGGPNRIGQGIEFDYC---CCHASFSLKEAGFETIMINCNPE----TVSTDYDIADRLYFESLTEEDI----- 685 (1162)
Q Consensus 618 ~kkviVlGsGp~RIGqgiEFDy~---~v~a~~aLr~~G~~tImIN~NPE----TVSTDyd~sDrLYFEplt~E~V----- 685 (1162)
T Consensus 3 k~kI~Vl~GG~S-----~EreVSl~Sg~~v~~~L~~~~y~v~~i~i~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (344)
T PRK01966 3 KIRVALLFGGRS-----AEHEVSLVSAKNILKALDKDKFEVIPIGIDKDGRWYLIDGSNMELNSDDPLRIEEKKSAELLL 77 (344)
T ss_pred CCEEEEEECCCC-----CCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 768999958788-----218999999999999761508859999983798877256411110245421012344432223
Q ss_pred ---HHHHHHHCCCCCCCEEEEECCCHHHHH--HHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf ---999987485678227998445124668--988888759838612752033102867899988870986685421121
Q gi|254780439|r 686 ---LEILRVEQQKGELVGIIVQFGGQTPLK--LSKILEKNQIPILGTQPDSIDLAEDRDRFQKLLMELDLNQPRNGISHS 760 (1162)
Q Consensus 686 ---~~I~~~E~p~g~~~~vi~q~gGqt~~~--la~~L~~~gv~ilGts~~~Id~aEDR~~F~~ll~~l~i~~p~~~~a~s 760 (1162)
T Consensus 78 ~~~~~~~~~~~--~~~D~vf~alHG~~GEDG~iQglLe~l~IPYtGs~~~asal~mDK~~tK~i~~~~gI~tp~~~~~~~ 155 (344)
T PRK01966 78 ALPGFYEGQLI--IEVDVVFPVLHGPPGEDGTIQGLLELLNIPYVGCGVLASAVSMDKILTKRLLAAAGIPQAPYVVLTR 155 (344)
T ss_pred CCCCCCCCCCC--CCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 45532210003--5678999906899976709999999759993688489999876699999999987999898399816
Q ss_pred HHHH---HHHHHHCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 5665---5565536971675134444565412554899999999975210132211112233333333455777745670
Q gi|254780439|r 761 VEHA---RLIACEIGFPLLIRPSYVLGGRAMQIVYSENMLQDYLLDTLPGLVSEEIKRQYPNDKTGQINTLLGTHPLLFD 837 (1162)
Q Consensus 761 ~eea---~~~a~~iGyPVLVRPSyVLGG~~M~Iv~~~~eL~~yl~~a~~~~~~~~~~~~~~~~~~~~~~~vs~~~pVlId 837 (1162)
T Consensus 156 ~~~~~~~~~~~~~l~~P~iVKP~~~GSSiGvs~v~~~~el~~ai~~a~~-----------------------~~~~vlvE 212 (344)
T PRK01966 156 SRREEAIAEVEEKLGLPVFVKPANLGSSVGISKVKNEEELEAALDLAFE-----------------------YDRKVLVE 212 (344)
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHH-----------------------CCCCCEEE
T ss_conf 6623458999986189879932899634325996899999999999986-----------------------39750575
Q ss_pred EECCCCEEEEEEEEEECCCEEEEEEECCCCHHCC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2201201001010230798499985201102152-------457627981686689999999999999998741335762
Q gi|254780439|r 838 SYLSDAMEIDVDALCQNDQVIVVGIIEHIEEAGI-------HSGDSACSLPSRSLSQQLKDELISQTKALAGALNVIGLI 910 (1162)
Q Consensus 838 kfl~~a~EiEVDai~Dg~~v~I~gimEHiE~aGV-------HSGDS~~v~PpqsLs~~~~~~i~~~t~~ia~~L~v~G~~ 910 (1162)
T Consensus 213 efI~-GrE~tv~vl~~~~~~~~l~~~Ei~~~~~fydy~~KY~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~~lg~rg~~ 291 (344)
T PRK01966 213 QGIK-GREIECAVLGYNDEPVASVPGEIVKDNDFYDYEAKYIDDSGATLVIPADLSEELTEQIRELAIKAFKALGCSGLA 291 (344)
T ss_pred CCCC-CEEEEEEEECCCCCEEEECCEEECCCCCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 1244-489999997489946773115871798751488810468971696678899999999999999999981997279
Q ss_pred EEEEEE-CCCEEEEEEECCCCC----CCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 478851-288599985244445----6304567773988999999998
Q gi|254780439|r 911 NVQYAI-KDGKIYILEVNPRAS----RTVPFIAKAIGFPVAKVAARII 953 (1162)
Q Consensus 911 NIQfa~-kd~~iYVIEvNpRaS----RtvPfvSKatG~pl~~iAt~v~ 953 (1162)
T Consensus 292 RiDf~~d~~g~~y~lEvNt~PGmT~~Sl~p~~a~~~G~s~~~li~~ii 339 (344)
T PRK01966 292 RVDFFLTEDGEIYLNEINTLPGFTPISMYPKLWEASGLSYPELIDRLI 339 (344)
T ss_pred EEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 898999089988999820899987547899999980999999999999