HHsearch alignment for GI: 254780439 and conserved domain: PRK03369

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.63  E-value=0.36  Score=27.03  Aligned_cols=71  Identities=18%  Similarity=0.217  Sum_probs=46.8

Q ss_pred             CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHCCC
Q ss_conf             65569999767754205054666888999999998797899974876501078451310043379999999999862898
Q gi|254780439|r    5 QDLKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEPITPEVVAKIIEKERPD   84 (1162)
Q Consensus         5 ~dikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~ePlt~e~v~~Ii~~E~pD   84 (1162)
T Consensus        10 ~~Gk~V~V~GlG~s-----------G~a~a~~L~~~G~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d   72 (487)
T PRK03369         10 TPGAPVLVAGAGVT-----------GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSSSDAVQQ------IADYA   72 (487)
T ss_pred             CCCCEEEEEEECHH-----------HHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEECCCCCHHH------HCCCC
T ss_conf             79898999915683-----------89999999978697999989825779998659948637622656------46778


Q ss_pred             EEEECCCC
Q ss_conf             89975887
Q gi|254780439|r   85 AILPTTGG   92 (1162)
Q Consensus        85 aIlp~~GG   92 (1162)
T Consensus        73 ~vV~SPGI   80 (487)
T PRK03369         73 LVVTSPGF   80 (487)
T ss_pred             EEEECCCC
T ss_conf             89989957