HHsearch alignment for GI: 254780439 and conserved domain: PRK03369
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.63 E-value=0.36 Score=27.03 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=46.8
Q ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHCCC
Q ss_conf 65569999767754205054666888999999998797899974876501078451310043379999999999862898
Q gi|254780439|r 5 QDLKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEPITPEVVAKIIEKERPD 84 (1162)
Q Consensus 5 ~dikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~ePlt~e~v~~Ii~~E~pD 84 (1162)
T Consensus 10 ~~Gk~V~V~GlG~s-----------G~a~a~~L~~~G~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d 72 (487)
T PRK03369 10 TPGAPVLVAGAGVT-----------GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSSSDAVQQ------IADYA 72 (487)
T ss_pred CCCCEEEEEEECHH-----------HHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEECCCCCHHH------HCCCC
T ss_conf 79898999915683-----------89999999978697999989825779998659948637622656------46778
Q ss_pred EEEECCCC
Q ss_conf 89975887
Q gi|254780439|r 85 AILPTTGG 92 (1162)
Q Consensus 85 aIlp~~GG 92 (1162)
T Consensus 73 ~vV~SPGI 80 (487)
T PRK03369 73 LVVTSPGF 80 (487)
T ss_pred EEEECCCC
T ss_conf 89989957