HHsearch alignment for GI: 254780439 and conserved domain: PRK05294
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=100.00 E-value=0 Score=3201.98 Aligned_cols=1061 Identities=67% Similarity=1.066 Sum_probs=1038.2
Q ss_pred CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECCCCHHHHHHHHHH
Q ss_conf 97766556999976775420505466688899999999879789997487650107845131004337999999999986
Q gi|254780439|r 1 MPKRQDLKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEPITPEVVAKIIEK 80 (1162)
Q Consensus 1 MP~~~dikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~ePlt~e~v~~Ii~~ 80 (1162)
T Consensus 1 MP~~~~ikkvLviGsGp~~IGqa~EfDysg~qa~~al~e~g~~vilvN~NpaTv~Td~~~ad~vY~ePlt~e~v~~Ii~~ 80 (1063)
T PRK05294 1 MPKRTDIKKILIIGSGPIVIGQACEFDYSGTQACKALREEGYRVVLVNSNPATIMTDPEMADATYIEPITPEFVEKIIEK 80 (1063)
T ss_pred CCCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHH
T ss_conf 99877878899989882510372332656999999999869989998798544107877664378727989999999997
Q ss_pred HCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 28988997588702688889988759628828757149989998605889999999987898886200023443333323
Q gi|254780439|r 81 ERPDAILPTTGGQTALNTALSLKRMGVLDRYGVEMIGAKPETIDKAEDRSLFSKAMQNIPLATPKSILANATDIKEHDRK 160 (1162)
Q Consensus 81 E~pDaIlp~~GGqtalnl~~~L~e~gil~~~~v~~lG~~~~~I~~~edR~~F~~~l~~~gip~~~s~~~~~~~~~~~~~~ 160 (1162)
T Consensus 81 E~Pd~il~~~GGQtaLnla~~L~~~GiL~~~~v~lLGt~~~~I~~aedR~~F~~~l~~i~~p~~~s~~~~---------- 150 (1063)
T PRK05294 81 ERPDAILPTMGGQTALNLALELAESGVLEKYGVELIGAKLEAIDKAEDRELFKEAMKKIGLPVPRSGIAH---------- 150 (1063)
T ss_pred HCCCEEEECCCCHHHHHHHHHHHHCCCHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHCC----------
T ss_conf 5999788667780599999999975967764972756999999977789999999997699999725309----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHH
Q ss_conf 33333344444444333322211111123344444445544489999999998719969994132678664511169999
Q gi|254780439|r 161 LHEEERENLKKTLSKEELDAALYALELKWNLEENDRKHRYICHAMAVAVQALDEIGLPLIIRPSFTLGGTGGGIAYNRSE 240 (1162)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ea~~~a~~iGyPvivRps~~lGG~G~~iv~n~ee 240 (1162)
T Consensus 151 -------------------------------------------s~~ea~~~a~~igyPvivRps~~LGG~g~~i~~n~~e 187 (1063)
T PRK05294 151 -------------------------------------------TMEEALEVAEEIGYPVIIRPSFTLGGTGGGIAYNREE 187 (1063)
T ss_pred -------------------------------------------CHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCHHH
T ss_conf -------------------------------------------9999999998659988998442167876404349999
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 99999989985799827986644997899999997289988999630000001000010134337322898899999999
Q gi|254780439|r 241 FLEIVENGLHASPTTEVLIEESVLGWKEYELEMMRDIKGNCIVVCSIENLDPMGVHTGDSITVAPALTLTDKEYQLMRNA 320 (1162)
Q Consensus 241 L~~~~~~al~~s~~~~vlIeksl~g~kEiE~eVirD~~gn~i~v~~~En~dp~GiHtGDSi~vaP~qTL~d~~~q~LR~~ 320 (1162)
T Consensus 188 L~~~~~~~~~~S~~~qvLie~sl~gwkEie~ev~rD~~~n~i~v~~mEnidp~GIHtGDSi~vaP~qTL~d~e~q~lR~~ 267 (1063)
T PRK05294 188 LEEIVERGLDLSPTTEVLIEESLLGWKEYEMEVMRDKADNCIIVCSIENIDPMGVHTGDSITVAPAQTLTDKEYQMLRDA 267 (1063)
T ss_pred HHHHHHHHHHHCCCCCEEEEHHCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHH
T ss_conf 99999999961999868966111798899999998189998999541135456456667253568865898999999999
Q ss_pred HHHHHHHHCCCC-CCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 999998718345-7646899995589849998504443103578887634614767776413446101357756777766
Q gi|254780439|r 321 AIAVLKEIGVES-GGANVQFAVNPKNGKMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELGNDITGGKTPA 399 (1162)
Q Consensus 321 a~kI~r~lgi~v-G~~nVQFAv~p~~~~~yvIEvNpR~sRssalaskatgypia~vaakl~~G~~L~ei~~~~~~~~~~a 399 (1162)
T Consensus 268 a~kI~~~L~i-v~G~~NiQfA~~p~~~~~~VIEvNPR~SRssalaSKaTGyPiA~vaaklalG~~L~ei~n~vT~~-t~A 345 (1063)
T PRK05294 268 SIAILREIGV-ETGGSNVQFAVNPKDGRYVVIEMNPRVSRSSALASKATGYPIAKVAAKLAVGYTLDEIKNDITGK-TPA 345 (1063)
T ss_pred HHHHHHHCCC-CCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCC-CCC
T ss_conf 9999998295-73644799987489984899963775001068888873887899999987179757836764466-314
Q ss_pred CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 65776776898544201211477666667731001002222676899999899750378767665576676645898999
Q gi|254780439|r 400 SFEPSIDYIVTKIPRFTFEKFPGSDVTLTTSMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIHIPSMESDNDPNAL 479 (1162)
Q Consensus 400 ~~Ep~ldyv~vK~p~f~f~kf~~~~~~Lgt~MkS~GEvm~iGr~f~eA~~KAlrsle~~~~g~~~~~~~~~~~~~~~~~l 479 (1162)
T Consensus 346 ~fEP~ldyv~vK~p~~~f~kf~~~~~~Lg~~mks~Gevm~igr~feea~~KAirSle~~~~gl~~~------~~~~~eel 419 (1063)
T PRK05294 346 SFEPSIDYVVTKIPRFAFEKFPGADRRLTTQMKSVGEVMAIGRTFEESLQKALRSLEIGLTGLDEK------EDLALEEI 419 (1063)
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC------CCCCHHHH
T ss_conf 447756659997047771003585443243011341022222328999999998442586677777------77899999
Q ss_pred HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHCCCCHHHHHH
Q ss_conf 9976079824899999999738978899877188989999999999999987530376-027999986533799889998
Q gi|254780439|r 480 RSAISIPCPDRLRTVAQALRLGVSVEETHQSSNIDPWFIQQIKMIVDVEHRIREHGLP-KDFQNLQAIKAMGFSDARLSI 558 (1162)
Q Consensus 480 ~~~L~~p~~~Rl~~i~eAlr~G~sv~ei~elT~Id~wFl~~i~~iv~~e~~l~~~~~~-~~~~~l~~aK~~GFSD~~IA~ 558 (1162)
T Consensus 420 ~~~L~~p~~~Rl~~i~eAlrrG~sveeI~elT~ID~wFL~ki~~Iv~~e~~l~~~~~~~l~~~~L~~aK~~GFSD~~IA~ 499 (1063)
T PRK05294 420 RRELKKPTPERIFYIAEAFRRGASVEEIHELTKIDPWFLEQIEEIVELEEELKEGGLPGLDAELLRELKRLGFSDARIAK 499 (1063)
T ss_pred HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHH
T ss_conf 99863799359999999998599999999987876999999999999999998489887999999999980998599998
Q ss_pred HHCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCC
Q ss_conf 85899999998898639847998621432443665855897206776665532235677741899727630201476653
Q gi|254780439|r 559 LSGIPCNEIRKIRHQMGLHPVFKCVDTCAGEFSSPTSYMYSTYETNFINKPVSEDKVSDRKKIVILGGGPNRIGQGIEFD 638 (1162)
Q Consensus 559 l~~~~e~~Vr~~R~~~~i~P~yK~VDtcAgEF~a~T~Y~YsTY~~e~~~~~~~e~~~~~~kkviVlGsGp~RIGqgiEFD 638 (1162)
T Consensus 500 l~~~~~~~Vr~~R~~~~I~P~yK~VDTcAgEF~a~T~Y~YSTY~~e------~e~~~~~~~kvlvlGsGp~rIGqgiEFD 573 (1063)
T PRK05294 500 LLGVTEDEVRKLRKELGIHPVYKRVDTCAAEFEADTPYMYSTYEEE------CESNPSDRKKVMILGGGPNRIGQGIEFD 573 (1063)
T ss_pred HHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEECCCC------CCCCCCCCCCEEEECCCCCCCCCCCCCH
T ss_conf 8499999999999987995389841563234566787267645777------7767778863799657773204442300
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH
Q ss_conf 18999999999659806996068652112324586379841678899999987485678227998445124668988888
Q gi|254780439|r 639 YCCCHASFSLKEAGFETIMINCNPETVSTDYDIADRLYFESLTEEDILEILRVEQQKGELVGIIVQFGGQTPLKLSKILE 718 (1162)
Q Consensus 639 y~~v~a~~aLr~~G~~tImIN~NPETVSTDyd~sDrLYFEplt~E~V~~I~~~E~p~g~~~~vi~q~gGqt~~~la~~L~ 718 (1162)
T Consensus 574 Y~~v~a~~alk~~G~~~imIN~NPETVSTD~d~sDrLYFEplt~E~V~~I~~~E~p~g----vi~qfGGQt~~nla~~L~ 649 (1063)
T PRK05294 574 YCCVHAALALREAGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIIEKEKPKG----VIVQFGGQTPLKLAKALE 649 (1063)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCE----EEEECCCCCHHHHHHHHH
T ss_conf 6799999999965981589537811111565667614543688999999999758987----999738836789999999
Q ss_pred HCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCHHHHH
Q ss_conf 75983861275203310286789998887098668542112156655565536971675134444565412554899999
Q gi|254780439|r 719 KNQIPILGTQPDSIDLAEDRDRFQKLLMELDLNQPRNGISHSVEHARLIACEIGFPLLIRPSYVLGGRAMQIVYSENMLQ 798 (1162)
Q Consensus 719 ~~gv~ilGts~~~Id~aEDR~~F~~ll~~l~i~~p~~~~a~s~eea~~~a~~iGyPVLVRPSyVLGG~~M~Iv~~~~eL~ 798 (1162)
T Consensus 650 ~~g~~ilGts~~~Id~aEDR~~F~~~l~~l~i~qp~~~~a~s~~ea~~~a~~iGyPvlvRPSyVLGG~~M~iv~~~~eL~ 729 (1063)
T PRK05294 650 AAGVPILGTSPDAIDLAEDRERFQKLLEKLGIKQPPNGTATSVEEALEIAEEIGYPVLVRPSYVLGGRAMEIVYDEEELE 729 (1063)
T ss_pred HCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCHHHHH
T ss_conf 87994777887887878758889999986599999970766899999999864986684343102577147856999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCEEEEEEECCCCHHCCCCCCEEE
Q ss_conf 99997521013221111223333333345577774567022012010010102307984999852011021524576279
Q gi|254780439|r 799 DYLLDTLPGLVSEEIKRQYPNDKTGQINTLLGTHPLLFDSYLSDAMEIDVDALCQNDQVIVVGIIEHIEEAGIHSGDSAC 878 (1162)
Q Consensus 799 ~yl~~a~~~~~~~~~~~~~~~~~~~~~~~vs~~~pVlIdkfl~~a~EiEVDai~Dg~~v~I~gimEHiE~aGVHSGDS~~ 878 (1162)
T Consensus 730 ~yl~~a~---------------------~vs~~~pvlIdkfl~ga~E~eVDai~Dg~~v~I~gImEHIE~AGVHSGDS~~ 788 (1063)
T PRK05294 730 RYMREAV---------------------KVSPDHPVLIDRFLEDAIEVDVDAICDGEDVLIGGIMEHIEEAGVHSGDSAC 788 (1063)
T ss_pred HHHHHHH---------------------HHCCCCCEEEEHHHHHCHHHHHHEEECCCEEEEEEEEEECCCCCCCCCCCEE
T ss_conf 9999998---------------------6389997786354320245443023148848999987200145756678428
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf 81686689999999999999998741335762478851288599985244445630456777398899999999859721
Q gi|254780439|r 879 SLPSRSLSQQLKDELISQTKALAGALNVIGLINVQYAIKDGKIYILEVNPRASRTVPFIAKAIGFPVAKVAARIIAGESL 958 (1162)
Q Consensus 879 v~PpqsLs~~~~~~i~~~t~~ia~~L~v~G~~NIQfa~kd~~iYVIEvNpRaSRtvPfvSKatG~pl~~iAt~v~lG~~L 958 (1162)
T Consensus 789 V~Pp~~Ls~~~~~~i~~~t~~ia~~l~v~G~~NiQf~vk~~~vyVIE~NpRaSRtvPfvSKatg~pl~~iAtk~~lG~~l 868 (1063)
T PRK05294 789 SLPPYTLSEEIIDEIREQTKKLALELNVVGLMNVQFAVKDDEVYVIEVNPRASRTVPFVSKATGVPLAKIAARVMLGKKL 868 (1063)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCH
T ss_conf 81685589999999999999999855666642033554098389999447444530445764199799999999829973
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEE
Q ss_conf 00246666777766687389972038834459998670775631013777419999999999998388798872599996
Q gi|254780439|r 959 DASIAAYGKRPDLSQIKHFAVKESVFPFNKFPGVDILLGPEMRSTGEVIGIDQDFPLAFAKSQLGIGVDLPHEGTVFVSV 1038 (1162)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~aVK~pvFsF~k~~g~D~~LGpEMkSTGEVmgig~~~~eA~~Ka~~a~g~~lP~~g~vfisv 1038 (1162)
T Consensus 869 ~~l~~~~~~-----~~~~v~VK~pvFsf~k~~g~d~~LGpEMkSTGEVmg~g~~~~eAl~Ka~~aag~~iP~~G~v~iSv 943 (1063)
T PRK05294 869 AELGYTKEI-----IPPHVSVKEAVFPFNKFPGVDPLLGPEMKSTGEVMGIDRTFGEAFAKAQLAAGNRLPTSGTVLVSV 943 (1063)
T ss_pred HHCCCCCCC-----CCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf 442788778-----888289975648743349999887877243434157349999999999986699889888799994
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHH
Q ss_conf 44128999999999998898999938889999987981569750568781078898679854999678998523110899
Q gi|254780439|r 1039 RDADKKRIVPIIQNFKKLGFKIMATEGTARFLESHGLETQKINKVLEGRPHIEDAISNRQVHLVINTTEGKKAIEDSKSL 1118 (1162)
Q Consensus 1039 ~d~dK~~~~~~a~~l~~lGf~l~AT~GTa~~L~~~Gi~~~~v~k~~e~~~~i~d~i~~~~i~lVINt~~~~~~~~dg~~i 1118 (1162)
T Consensus 944 ~d~dK~~~~~~a~~l~~lGf~i~AT~GTa~~L~~~GI~~~~V~Kv~e~~p~i~d~i~~~~I~lVINt~~~~~~~~dg~~I 1023 (1063)
T PRK05294 944 RDRDKEEVVELAKRLLELGFKILATEGTAKFLEEAGIPVELVNKVHEGRPHIVDLIKNGEIDLVINTPEGRQAIRDGFSI 1023 (1063)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHH
T ss_conf 24257999999999997699899841789999976991599646578992599999769826999799998777762999
Q ss_pred HHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCEEECHHHC
Q ss_conf 999997099799459999999999996105897177745531
Q gi|254780439|r 1119 RRATLIRKIPYYTTIAGADAVFQAIQALKAGNLEVHSLQSYR 1160 (1162)
Q Consensus 1119 Rr~Ai~~~ip~~T~~~~a~a~~~al~~~~~~~~~v~slqey~ 1160 (1162)
T Consensus 1024 RR~Av~~~IP~~Tsl~~A~a~v~al~~~~--~~~v~~lqey~ 1063 (1063)
T PRK05294 1024 RRAALEYKVPYITTLAGARAAAEAIEALK--ELEVRSLQEYH 1063 (1063)
T ss_pred HHHHHHHCCCEEECHHHHHHHHHHHHHHH--CCCCEEHHHCC
T ss_conf 99999709998967999999999999721--68830555409