HHsearch alignment for GI: 254780439 and conserved domain: PRK05335

>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed.
Probab=92.85  E-value=0.53  Score=25.73  Aligned_cols=37  Identities=30%  Similarity=0.470  Sum_probs=31.9

Q ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE
Q ss_conf             569999767754205054666888999999998797899974876501
Q gi|254780439|r    7 LKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATI   54 (1162)
Q Consensus         7 ikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi   54 (1162)
T Consensus         3 ~~~ViVIGgGhA-----------G~EAA~a~Ar~G~~v~L~emrp~~~   39 (434)
T PRK05335          3 MKPVNVIGAGLA-----------GSEAAWQLAKRGVPVELYEMRPVKK   39 (434)
T ss_pred             CCCEEEECCCHH-----------HHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             885699898689-----------9999999996899679999335667