HHsearch alignment for GI: 254780439 and conserved domain: PRK09117
>PRK09117 consensus.
Probab=95.81 E-value=0.066 Score=32.91 Aligned_cols=227 Identities=17% Similarity=0.164 Sum_probs=110.2
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCC----CCCE-EECCCCHHHHHHHHHH
Q ss_conf 5569999767754205054666888999999998797899974876501078451----3100-4337999999999986
Q gi|254780439|r 6 DLKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDL----ADAT-YTEPITPEVVAKIIEK 80 (1162)
Q Consensus 6 dikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~----aD~v-Y~ePlt~e~v~~Ii~~ 80 (1162)
T Consensus 1 sI~~VaViGaG~m-----------G~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 69 (282)
T PRK09117 1 SIQTVGIIGAGTM-----------GNGIAQACAVAGLDVVMVDISDAAVQRGLATVAGSLDRLIKKEKLTEADKAAALAR 69 (282)
T ss_pred CCCEEEEECCCHH-----------HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 9177999897799-----------99999999967996899989889999999999999999997068877889999840
Q ss_pred HCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 28988997588702688889988759628828757149989998605889999999987898886200023443333323
Q gi|254780439|r 81 ERPDAILPTTGGQTALNTALSLKRMGVLDRYGVEMIGAKPETIDKAEDRSLFSKAMQNIPLATPKSILANATDIKEHDRK 160 (1162)
Q Consensus 81 E~pDaIlp~~GGqtalnl~~~L~e~gil~~~~v~~lG~~~~~I~~~edR~~F~~~l~~~gip~~~s~~~~~~~~~~~~~~ 160 (1162)
T Consensus 70 ---------i~~~~d~~---a~~~aDl-------ViEa------v~E~l~iK~~lf~~l~~~~~~~~IlaSNT-S~l--- 120 (282)
T PRK09117 70 ---------IKGSTDYD---ALKDADL-------VIEA------ATENLDLKLKILKQLDALVGPDAIIATNT-SSI--- 120 (282)
T ss_pred ---------CCCCCCHH---HHCCCCE-------EEEC------CCCCHHHHHHHHHHHHHHCCCCCEEEECC-CCC---
T ss_conf ---------65679989---9755999-------9987------85888888999999986579981898658-767---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCC------CCCCCCCCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCC
Q ss_conf 33333344444444333322211-111------123344444445544489999999998719-9699941326786645
Q gi|254780439|r 161 LHEEERENLKKTLSKEELDAALY-ALE------LKWNLEENDRKHRYICHAMAVAVQALDEIG-LPLIIRPSFTLGGTGG 232 (1162)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~s~~ea~~~a~~iG-yPvivRps~~lGG~G~ 232 (1162)
T Consensus 121 ---------~i~~ia~~~~~p~R~ig~HffnP~~~~~LVEiv~g~~Ts~~~~~~~~~~~~~lgk~pV~vkd~------pG 185 (282)
T PRK09117 121 ---------SITKLAAATSRPDRFIGMHFFNPVPMMALVELIRGLQTSDATHAAVEALAKRLGKTPITVKNS------PG 185 (282)
T ss_pred ---------CCHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECC------CC
T ss_conf ---------617788764984641554556886658448864999998999999999999739879998167------88
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCE
Q ss_conf 1116999999999989985799827986644997899999997289988999630000001000010
Q gi|254780439|r 233 GIAYNRSEFLEIVENGLHASPTTEVLIEESVLGWKEYELEMMRDIKGNCIVVCSIENLDPMGVHTGD 299 (1162)
Q Consensus 233 ~iv~n~eeL~~~~~~al~~s~~~~vlIeksl~g~kEiE~eVirD~~gn~i~v~~~En~dp~GiHtGD 299 (1162)
T Consensus 186 Fi~NRl--~~a~~~ea~~l-------v~eGva~~~~ID~-~~~~g~g~p--~GPf~l~D~~GlD~~~ 240 (282)
T PRK09117 186 FVVNRI--LCPMINEAIFV-------LGEGLATAEDIDE-GMKLGCNHP--IGPLALADMIGLDTML 240 (282)
T ss_pred CCHHHH--HHHHHHHHHHH-------HHCCCCCHHHHHH-HHHCCCCCC--CCHHHHHHHHHHHHHH
T ss_conf 109999--99999999999-------9849999999998-735079996--6489998863388999